☆18Oct 21, 2024Updated last year
Alternatives and similar repositories for human_legnet
Users that are interested in human_legnet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for improving the performance of sequence-to-expression models for making individual-specific gene expression predictions by fine-tu…☆20Mar 15, 2026Updated 6 months ago
- PARM: Promoter Activity Regulatory Model☆26Jul 27, 2026Updated last month
- A fast dataloader for bigwig files made for machine learning☆29Dec 16, 2025Updated 9 months ago
- ☆10Jan 19, 2019Updated 7 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆17Jun 25, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- AlphaGenome PyTorch port☆161Updated this week
- ☆36Jan 27, 2025Updated last year
- ☆29Nov 7, 2023Updated 2 years ago
- Analyses related to the Borzoi paper.☆32Dec 14, 2025Updated 9 months ago
- A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution☆15Jul 14, 2026Updated 2 months ago
- Code repository for study ''Evaluating the representational power of pre-trained DNA language models for regulatory genomics"☆27Jun 26, 2024Updated 2 years ago
- DeepSEA implements in PyTorch☆25Jun 5, 2019Updated 7 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆30Oct 7, 2022Updated 3 years ago
- EPInformer workflows for gene-expression prediction from DNA sequence, epigenomic signals, and chromatin contacts.☆61Jul 17, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Toolset for training quantitative sequence to function models.☆23Mar 15, 2024Updated 2 years ago
- ☆11Oct 6, 2017Updated 8 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆45Jul 3, 2025Updated last year
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆99Jun 10, 2026Updated 3 months ago
- Analyze 3'UTR usage in single-cell data.☆15Sep 25, 2021Updated 4 years ago
- For fine-tuning Enformer using paired WGS & gene expression data☆32Aug 27, 2025Updated last year
- Analyse enhancer strength based on MPRA experiments.☆13Nov 12, 2020Updated 5 years ago
- ☆13Jan 23, 2025Updated last year
- Downloader for ENCODE☆32Oct 5, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- LDPC codes for Illumina sequencing-based DNA storage☆11Dec 2, 2020Updated 5 years ago
- ☆52Mar 22, 2026Updated 5 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Feb 12, 2026Updated 7 months ago
- Chromatin interaction aware gene regulatory modeling with graph attention networks☆29Feb 21, 2023Updated 3 years ago
- Biological sequence analysis for the modern age.☆311Updated this week
- ☆12Sep 4, 2025Updated last year
- An implementation of neural architecture search using the REINFORCE algorithm. we use a re-current network to generate the model descript…☆12Jun 13, 2020Updated 6 years ago
- A method for analyzing scATAC-seq experiments.☆33Jun 20, 2025Updated last year
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Oct 31, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code repository for the manuscript: Nucleotide dependency analysis of DNA language models reveals genomic functional elements☆30Aug 3, 2026Updated last month
- ☆12May 22, 2024Updated 2 years ago
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆84Jun 4, 2026Updated 3 months ago
- pipeline for demultiplex and align both ATAC and RNA data generated in SHARE-seq☆16Jun 20, 2022Updated 4 years ago
- Website about the project WorkflowHub☆14Aug 21, 2026Updated 3 weeks ago
- The official repository for the ARSENAL model☆20Jul 3, 2026Updated 2 months ago
- A simple cv template written in LaTex☆12Aug 14, 2021Updated 5 years ago