attractivechaos / khashlLinks
Generic hash table library in C
☆31Updated last month
Alternatives and similar repositories for khashl
Users that are interested in khashl are comparing it to the libraries listed below
Sorting:
- ☆23Updated 2 months ago
- libstrbuf: A powerful string library for C☆17Updated 8 years ago
- Algorithms that work on generic C arrays☆11Updated 8 years ago
- Bit packed vector of integral values☆27Updated 4 months ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Updated 5 years ago
- Header-only, gzread-like reader for gzip, bz2, and xz.☆12Updated 6 years ago
- Five implementations of double linked lists to demonstrate generic data structures in C☆16Updated 5 years ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆43Updated last year
- Low memory multithreaded hash table☆24Updated 10 years ago
- The esa-matchfinder is a C99 library for efficient Lempel-Ziv factorization using enhanced suffix array (ESA).☆23Updated 2 months ago
- memory mapped multimap, multiset, and implicit interval tree based on an in-place parallel sort☆27Updated 4 years ago
- Essential C++ utilities.☆15Updated 3 weeks ago
- 📖 🧬 SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.☆87Updated this week
- Minimal yet colorful logging lib.☆34Updated 10 years ago
- modified from gitlab.com/manzai/Big-BWT to support fasta files☆9Updated 4 months ago
- For details, see the blog post:☆32Updated last year
- Efficient construction of the BWT using string compression☆18Updated 2 weeks ago
- SIMD-parallel BLAST X-drop DP on sequence graphs☆25Updated last year
- Portable qsort_r / qsort_s☆54Updated last year
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆84Updated last year
- Custom compression for CRAM and others.☆33Updated last month
- Variant on Wang Yi's wyhash with 32-bit output, using at most 64-bit math☆26Updated 6 years ago
- single file C libraries☆38Updated 5 months ago
- Implementation of eBWT using Prefix-free parse (PFP)☆14Updated 10 months ago
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- ♥ Essential Functions for DNA Manipulation☆20Updated last week
- Stackless coroutine compiler for C☆46Updated 5 years ago
- An exploratory implementation of bit overloads of the C++ standard algorithms☆18Updated 4 years ago
- Bicriteria Data Compressor☆14Updated 7 years ago
- bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends w…☆11Updated 4 months ago