aomlomics / tutorialsLinks
Tutorials for data science and bioinformatics
☆13Updated last year
Alternatives and similar repositories for tutorials
Users that are interested in tutorials are comparing it to the libraries listed below
Sorting:
- A DRAFT, early stage book on snakemake.☆22Updated 2 years ago
- Using ggtree to Visualize Data on Tree-Like Structure☆25Updated 5 years ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Updated last year
- ☆14Updated 5 years ago
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2…☆10Updated 7 years ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Updated last year
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- Mapping NCBI Genbank accession to GTDB accession☆14Updated 4 years ago
- ☆13Updated 8 years ago
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Updated last year
- A place to put docker build files☆13Updated 2 years ago
- Lecture on viral phylodynamics☆11Updated 4 years ago
- SARS-CoV-2 variant calling and consensus assembly pipeline☆26Updated 2 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Updated last year
- Quality control for phylogenetic analyses☆13Updated last week
- deploy a snakemake pipeline directly from version control (under development)☆24Updated 2 weeks ago
- A statically generated catalog of available Snakemake workflows☆36Updated this week
- Welcome to the StrainHub Repo - Files and Data - StrainHub Online:☆17Updated 3 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated 2 months ago
- ☆16Updated 2 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Build and maintain multiple custom conda environments all in one place.☆40Updated last year
- STAMPS 2018 course☆15Updated 7 years ago
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆14Updated 2 months ago
- Snakemake skeleton - Build workflows with Snakemake☆19Updated last year
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Updated 6 months ago
- Luslab nextflow modules☆14Updated 4 years ago
- An open database of vertebrate-virus interactions☆40Updated last month
- Listing of GPU based bioinformatics software & sites & publications☆11Updated 4 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago