Tutorial for Metagenomics Analyses
☆10Jun 16, 2020Updated 5 years ago
Alternatives and similar repositories for metagenomics
Users that are interested in metagenomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A repository for the lessons and notebooks used for Binder tutorials☆19Aug 4, 2020Updated 5 years ago
- A repository for the R, Python, and Javascript notebooks and files associated with the ODSC West 2021 tutorial -- Visualizing and Analyzi…☆11Nov 17, 2021Updated 4 years ago
- ☆12Jan 27, 2023Updated 3 years ago
- ☆19Dec 11, 2024Updated last year
- Learning materials for the 3000788 Introduction to Computational Molecular Biology course☆23Nov 19, 2025Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- NGS-1 Data analysis course☆38Jul 8, 2021Updated 4 years ago
- A repo with just adapter sequences☆15Jul 7, 2025Updated 9 months ago
- Hardware Accelerated Read Until☆17Sep 30, 2025Updated 6 months ago
- Test sets and pipeline scripts for pan-genomic graph analysis☆17Jan 30, 2025Updated last year
- ☆24Feb 6, 2025Updated last year
- Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the…☆14Mar 25, 2022Updated 4 years ago
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- Graphinate. Data to Graphs.☆24Mar 22, 2026Updated 3 weeks ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Jan 30, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Executable files for usearch versions 5 through 11, donated to the public domain☆24Jun 15, 2024Updated last year
- A tutorial for Metagenome-Atlas☆23Nov 24, 2023Updated 2 years ago
- Materials for the STAMPS 2022 course at the MBL in Woods Hole, MA, USA☆22Aug 2, 2022Updated 3 years ago
- mapping files for MetaCyc pathway☆13Sep 14, 2019Updated 6 years ago
- ☆28Sep 28, 2024Updated last year
- Compilation of tutorials for RevBayes☆23Aug 20, 2018Updated 7 years ago
- Structure from motion pipeline (Bundler + CMVS + PMVS2) ready to run on Docker☆30Jun 20, 2025Updated 9 months ago
- I'm building what might be the smallest #opensource #spectrometer with an easy to use UI! I call it a pocket spectrometer. Combining #M5S…☆33Feb 16, 2025Updated last year
- A microbial profiling framework for metagenomic analysis☆24Apr 9, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods☆10Jan 19, 2022Updated 4 years ago
- Tutorial on using E-utilities☆23Mar 20, 2025Updated last year
- These are the R markdown files used to generate☆21Mar 25, 2026Updated 3 weeks ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆14Mar 14, 2024Updated 2 years ago
- Microbial Whole Genome Sequence data analysis labs for 2014☆29Jul 31, 2020Updated 5 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- A python toolbox for 13C metabolic flux analysis☆23Jul 7, 2025Updated 9 months ago
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated last year
- List of genome assembly tools☆95Apr 1, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Jan 24, 2025Updated last year
- Ressources for Boinformatics Trainings☆13Nov 20, 2023Updated 2 years ago
- ☆13Dec 3, 2024Updated last year
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆13Oct 1, 2025Updated 6 months ago
- ☆17Jul 3, 2018Updated 7 years ago
- A tool for domain based annotation with databases from the Conserved Domains Database☆30Mar 18, 2026Updated last month
- Command line utility for working with next-generation sequencing files.☆38Jun 24, 2025Updated 9 months ago