Alternatives and similar repositories for automancer

Users that are interested in automancer are comparing it to the libraries listed below

• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆55Updated 11 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• wells-wood-research / timed-design
  Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis
  ☆60Updated 2 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆73Updated last month
• GBLille / MassiveFold
  ☆102Updated last week
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆63Updated last month
• proteinphysiologylab / frustratometeR
  ☆37Updated 3 months ago
• hgbrian / biomodals
  bioinformatics tools running on modal
  ☆102Updated this week
• greener-group / progres
  Fast protein structure searching or your money back
  ☆114Updated last week
• suzuki-2001 / adaptyv-protein-comp
  Design data and process for the AdaptyvBio protein design competition
  ☆10Updated 9 months ago
• twoXes / awesome-structural-bioinformatics
  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…
  ☆73Updated 2 years ago
• PDB-REDO / AlphaBridge
  ☆43Updated 2 weeks ago
• microsoft / dayhoff
  ☆59Updated 2 months ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆56Updated 2 weeks ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆58Updated 6 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆47Updated 6 months ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• amirpandi / Deep_AMP
  Generator and regressor neural networks for antimicrobial peptides
  ☆25Updated last year
• agitter / adaptyvbio-egfr
  Sequences from Adaptyv Bio’s EGFR Protein Design Competition
  ☆15Updated last month
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 3 months ago
• BGI-SynBio / PyMOL-PUB
  Rapid generation of high-quality structure figures for publication with PyMOL-PUB
  ☆78Updated 11 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 6 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• modernatx / therapeutic_enzyme_engineering_with_generative_neural_networks
  ☆12Updated 2 years ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆74Updated 2 weeks ago
• adaptyvbio / egfr_competition_1
  This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.
  ☆34Updated 9 months ago
• BioinfoMachineLearning / MULTICOM3
  The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…
  ☆30Updated last year
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆20Updated 2 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago