A bare-metal Python library for building and manipulating the molecular structures of proteins, nucleic acids, and small organic molecules
☆20Oct 4, 2026Updated this week
Alternatives and similar repositories for Pose
Users that are interested in Pose are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MCP server for Rosetta/PyRosetta and Biotite: give your AI coding agent expert-level knowledge of protein modeling and design - ask naive…☆19Apr 5, 2026Updated 6 months ago
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆15May 26, 2026Updated 4 months ago
- ☆13May 24, 2026Updated 4 months ago
- ☆15Apr 17, 2025Updated last year
- Python rich client for visual protein Sequence to Structure Analysis☆22Mar 31, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Design platform for creating single-chain polyhedral cages made from coiled-coil building modules☆25Oct 12, 2017Updated 8 years ago
- ☆24Aug 6, 2026Updated 2 months ago
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆55Sep 15, 2026Updated 3 weeks ago
- ☆39Aug 28, 2023Updated 3 years ago
- ☆13Jul 25, 2025Updated last year
- ☆14Aug 26, 2026Updated last month
- A tutorial for Streamlined Alchemical Free Energy Perturbations with NAMD☆17Apr 3, 2026Updated 6 months ago
- Source code for The Protein Design Archive web application.☆10Aug 12, 2026Updated last month
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scoring methods for predicting the DDG upon protein mutation☆18Feb 20, 2023Updated 3 years ago
- ☆21Oct 26, 2024Updated last year
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 3 years ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆192Oct 7, 2025Updated last year
- ☆33Aug 8, 2025Updated last year
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆17Updated this week
- Automatic Mutual Information Noise Omission☆16Oct 8, 2024Updated 2 years ago
- ☆15Nov 11, 2023Updated 2 years ago
- An open-source Rust implementation of Shape Complementarity (SC)☆20Oct 2, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python Data and Scripting course for computational chemists☆89Jun 30, 2024Updated 2 years ago
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆43Oct 9, 2024Updated 2 years ago
- Cryptic pocket prediction using AlphaFold 2☆25Nov 27, 2022Updated 3 years ago
- TUPÃ: Electric field analyses for molecular simulations☆25Jun 12, 2026Updated 3 months ago
- Associated code/pipeline for the publication "AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting d…☆16Feb 18, 2025Updated last year
- ☆46Jan 10, 2024Updated 2 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 3 years ago
- Files and utilities for protein-emoji☆26Nov 4, 2022Updated 3 years ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Nov 25, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- JAX translation of boltz☆32Aug 11, 2026Updated last month
- CAPLA: improved prediction of protein-ligand binding affinity by a deep learning approach based on a cross-attention mechanism☆26Nov 9, 2022Updated 3 years ago
- Rank binders by structure modeling☆17Apr 10, 2026Updated 6 months ago
- A Nextflow pipeline for protein binder design☆23Sep 25, 2026Updated 2 weeks ago
- ☆16Jun 11, 2021Updated 5 years ago
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆51Nov 4, 2025Updated 11 months ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago