A bare-metal Python library for building and manipulating the molecular structures of proteins, nucleic acids, and small organic molecules
☆22Oct 28, 2026Updated this week
Alternatives and similar repositories for Pose
Users that are interested in Pose are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆16May 26, 2026Updated 5 months ago
- ☆13May 24, 2026Updated 5 months ago
- MCP server for Rosetta/PyRosetta and Biotite: give your AI coding agent expert-level knowledge of protein modeling and design - ask naive…☆19Apr 5, 2026Updated 6 months ago
- prepare AMBER files for MD simulations from a pdb file☆13Jul 6, 2025Updated last year
- Cyclic peptide binder design using a fragment docking and assembling strategy☆12May 20, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python rich client for visual protein Sequence to Structure Analysis☆22Mar 31, 2026Updated 6 months ago
- ☆18Feb 20, 2024Updated 2 years ago
- ☆15Apr 17, 2025Updated last year
- TrDesign w/ Partial Hallucination support☆10Apr 29, 2022Updated 4 years ago
- Design platform for creating single-chain polyhedral cages made from coiled-coil building modules☆25Oct 12, 2017Updated 9 years ago
- ☆24Aug 6, 2026Updated 2 months ago
- Graph neural network for modeling multispecific antibody functional data☆14Feb 2, 2026Updated 8 months ago
- A simple tool for creating and running MD simulations, using Jupyter and OpenMM☆12Aug 8, 2025Updated last year
- Supporting information for predicting and engineering post-translational modifcations using Rosetta☆10Feb 13, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Rank binders by structure modeling☆11Apr 10, 2026Updated 6 months ago
- ☆13Mar 4, 2026Updated 7 months ago
- GlycoShape Database, APIs and Tools.☆12Aug 11, 2025Updated last year
- ☆13Jul 25, 2025Updated last year
- Introductions to AlphaFold, RoseTTAFold, and OmegaFold covered in the course CHEM5570-100 at the University of Oklahoma☆12Dec 8, 2023Updated 2 years ago
- ☆39Aug 28, 2023Updated 3 years ago
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆55Sep 15, 2026Updated last month
- A tutorial for Streamlined Alchemical Free Energy Perturbations with NAMD☆17Apr 3, 2026Updated 6 months ago
- ☆13May 26, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- ☆21Oct 26, 2024Updated 2 years ago
- Source code for The Protein Design Archive web application.☆10Oct 16, 2026Updated 2 weeks ago
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆26Aug 14, 2026Updated 2 months ago
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 3 years ago
- This is a SnakeMake based workflow for ABFE calculations that can be easily scaled in a high-throughput manner via Slurm for example.☆66Dec 17, 2025Updated 10 months ago
- Scripts and data to run AbDesign as described in Tools for protein science 2021☆13Nov 4, 2020Updated 5 years ago
- Inpainting protein sequence and structure☆13Nov 10, 2023Updated 2 years ago
- ☆34Feb 5, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆22Dec 3, 2024Updated last year
- AlphaFold 3 inference pipeline.☆19Updated this week
- ☆13Jun 7, 2025Updated last year
- Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations☆17Updated this week
- ☆16Aug 22, 2025Updated last year
- This Python package implements an extension to the k-means clustering algorithm for use with missing data.☆13Jun 27, 2020Updated 6 years ago
- Scoring methods for predicting the DDG upon protein mutation☆18Feb 20, 2023Updated 3 years ago