YuLab-SMU / treedataverseLinks
Meta package for processing and visualizing tree with data
☆28Updated 3 years ago
Alternatives and similar repositories for treedataverse
Users that are interested in treedataverse are comparing it to the libraries listed below
Sorting:
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆56Updated 11 months ago
- Python version of PHLAWD☆21Updated 7 months ago
- babette is an R package to work with BEAST2☆46Updated 2 weeks ago
- Scalable relaxed clock phylogenetic dating☆25Updated last year
- Tools for extracting individual genomes from metagenomes☆17Updated last year
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆41Updated 9 months ago
- R We There Yet?☆30Updated 3 months ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- initial commit☆26Updated 2 years ago
- Analysis of Phylogenetics and Evolution☆70Updated 3 weeks ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last week
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- ☆19Updated last year
- Phylogenetic Organization of Metagenomic Signals (POMS)☆19Updated 2 years ago
- the hierfstat package☆25Updated 7 months ago
- ☆25Updated 3 years ago
- R package for microbial pangenomics☆23Updated 3 years ago
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- Population Genomics in R workshop☆12Updated last year
- ☆21Updated 2 years ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Updated last week
- A program for multimodel inference on speciation and trait evolution☆33Updated 7 years ago
- que paquete☆9Updated 11 months ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 11 months ago
- ☆30Updated 3 weeks ago
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)☆38Updated last year
- A smorgasbord of R functions for population genomic analyses☆18Updated 3 weeks ago
- Speedy versions of phyloseq functions☆47Updated last year
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆33Updated 4 years ago
- ☆27Updated last year