qingyu-qc / gpt_bionlp_benchmark
☆25Updated last year
Alternatives and similar repositories for gpt_bionlp_benchmark:
Users that are interested in gpt_bionlp_benchmark are comparing it to the libraries listed below
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆61Updated last year
- MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023☆48Updated last year
- Biomedical Question Answering Datasets.☆93Updated last year
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆55Updated last year
- ☆57Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 2 years ago
- ISMB'24 "Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models"☆48Updated 10 months ago
- ☆49Updated 2 years ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆12Updated 6 months ago
- EMNLP'22 | PromptEHR: Conditional Electronic Healthcare Records Generation with Prompt Learning☆28Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 3 months ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆27Updated 10 months ago
- [ACL 2024 Findings] This is the code for our paper "Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation wi…☆38Updated 7 months ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering☆21Updated 3 years ago
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆18Updated 10 months ago
- This repository lists papers, codes, and datasets in Biomedical Text Summarisation based on PLM☆23Updated 2 years ago
- Implements ChatGPT API via request package.☆45Updated last year
- auto icd coding with prompt☆48Updated 9 months ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆183Updated last year
- PMC-Patients☆92Updated 8 months ago
- BioELECTRA☆51Updated 3 years ago
- Biomedical Entity Linking Benchmark☆11Updated 2 months ago
- Transformers for Clinical NLP☆23Updated 3 weeks ago
- AIONER☆49Updated 6 months ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 9 months ago
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)☆17Updated 2 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- Dataset and Evaluation Code for the K-QA Benchmark.☆14Updated 8 months ago