MiuLab / PLM-ICDLinks
PLM-ICD: Automatic ICD Coding with Pretrained Language Models
☆69Updated last year
Alternatives and similar repositories for PLM-ICD
Users that are interested in PLM-ICD are comparing it to the libraries listed below
Sorting:
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 2 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated last year
- auto icd coding with prompt☆49Updated last year
- General tutorials for the setup and use of MedCAT.☆37Updated last month
- ☆61Updated last year
- PMC-Patients☆97Updated last year
- ☆87Updated 10 months ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- ☆39Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- A collection of papers on automated medical coding from free-texts☆144Updated 6 months ago
- all scripts used in gatortron project☆118Updated last year
- ☆18Updated last year
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆94Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆67Updated last year
- A Label Attention Model for ICD Coding from Clinical Text☆70Updated 2 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 10 months ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆81Updated last month
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆192Updated 2 years ago
- Blog post on Medium☆49Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆75Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- Clinical text summarization by adapting large language models☆143Updated 10 months ago
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆40Updated 5 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆62Updated last week
- NER and Relation Extraction from Electronic Health Records (EHR).☆88Updated 3 years ago
- A project for developing transformer-based models for clinical relation extraction☆128Updated last year