MiuLab / PLM-ICDLinks
PLM-ICD: Automatic ICD Coding with Pretrained Language Models
☆71Updated last year
Alternatives and similar repositories for PLM-ICD
Users that are interested in PLM-ICD are comparing it to the libraries listed below
Sorting:
- A collection of papers on automated medical coding from free-texts☆144Updated 6 months ago
- Clinical text summarization by adapting large language models☆144Updated 11 months ago
- General tutorials for the setup and use of MedCAT.☆38Updated last month
- PMC-Patients☆98Updated last year
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆30Updated last year
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆68Updated last year
- all scripts used in gatortron project☆121Updated last year
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 2 years ago
- auto icd coding with prompt☆49Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆81Updated last month
- ☆61Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆149Updated last year
- ☆88Updated 10 months ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆106Updated 10 months ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- Med-BERT, contextualized embedding model for structured EHR data☆290Updated last year
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆189Updated last year
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 11 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- Recognize bio-medical entities from a text corpus☆124Updated last year
- A large-scale (194k), Multiple-Choice Question Answering (MCQA) dataset designed to address realworld medical entrance exam questions.☆219Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆161Updated 3 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆86Updated 7 months ago
- Transformers for Clinical NLP☆25Updated 2 weeks ago
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆116Updated 3 years ago
- A simple python library for ICD-10-CM codes☆69Updated 3 weeks ago