MiuLab / PLM-ICDLinks
PLM-ICD: Automatic ICD Coding with Pretrained Language Models
☆71Updated last year
Alternatives and similar repositories for PLM-ICD
Users that are interested in PLM-ICD are comparing it to the libraries listed below
Sorting:
- A collection of papers on automated medical coding from free-texts☆145Updated 7 months ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆54Updated 2 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆30Updated 2 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆81Updated 2 months ago
- General tutorials for the setup and use of MedCAT.☆38Updated 2 months ago
- Med-BERT, contextualized embedding model for structured EHR data☆294Updated last year
- all scripts used in gatortron project☆123Updated last year
- ☆61Updated 2 years ago
- auto icd coding with prompt☆49Updated last year
- Medical Concept Annotation Tool☆503Updated last week
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated last year
- ☆89Updated 11 months ago
- PMC-Patients☆98Updated last year
- ☆40Updated 2 years ago
- Clinical text summarization by adapting large language models☆148Updated last year
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆68Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆424Updated 2 years ago
- Tools for curating biomedical training data for large-scale language modeling☆482Updated 7 months ago
- PubMedQA: A Dataset for Biomedical Research Question Answering☆353Updated 2 years ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆197Updated last year
- A new collection of 1.7k doctor-patient conversations and corresponding clinical notes/summaries.☆82Updated 2 months ago
- ☆99Updated 3 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆106Updated 11 months ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆63Updated last month