MiuLab / PLM-ICDLinks
PLM-ICD: Automatic ICD Coding with Pretrained Language Models
☆68Updated last year
Alternatives and similar repositories for PLM-ICD
Users that are interested in PLM-ICD are comparing it to the libraries listed below
Sorting:
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- A collection of papers on automated medical coding from free-texts☆142Updated 5 months ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated last year
- auto icd coding with prompt☆49Updated last year
- General tutorials for the setup and use of MedCAT.☆37Updated last week
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆74Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆79Updated last week
- all scripts used in gatortron project☆118Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- PMC-Patients☆96Updated 11 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆66Updated last year
- ☆37Updated last year
- ☆87Updated 9 months ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 10 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆93Updated 11 months ago
- ☆60Updated last year
- ☆98Updated 3 years ago
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆39Updated 4 months ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- Implements ChatGPT API via request package.☆45Updated 2 years ago
- ☆18Updated last year
- A project for developing transformer-based models for clinical relation extraction☆128Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆28Updated last year
- Med-BERT, contextualized embedding model for structured EHR data☆286Updated last year
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆105Updated 9 months ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆79Updated 6 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆62Updated last year