som-shahlab / medalign
MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
☆94Updated last year
Alternatives and similar repositories for medalign:
Users that are interested in medalign are comparing it to the libraries listed below
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆104Updated 7 months ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆161Updated last month
- MedAgentBench: A Realistic Virtual EHR Environment to Benchmark Medical LLM Agents☆61Updated last month
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆145Updated 2 months ago
- Clinical text summarization by adapting large language models☆138Updated 8 months ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆27Updated last year
- ☆89Updated last month
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆63Updated last year
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆57Updated last year
- [EMNLP'24] EHRAgent: Code Empowers Large Language Models for Complex Tabular Reasoning on Electronic Health Records☆88Updated 3 months ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆170Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆27Updated 11 months ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records☆30Updated 3 months ago
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆31Updated last year
- all scripts used in gatortron project☆115Updated last year
- ☆50Updated last year
- Biomedical Question Answering Datasets.☆99Updated last year
- For Med-Gemini, we relabeled the MedQA benchmark; this repo includes the annotations and analysis code.☆49Updated 9 months ago
- Implements ChatGPT API via request package.☆45Updated last year
- ☆72Updated last year
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆111Updated last year
- ☆80Updated 7 months ago
- LLM Embeddings for ICD 10 Data☆47Updated 3 months ago
- Self-verification for LLMs.☆64Updated last year
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆77Updated 4 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 5 months ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆13Updated 7 months ago
- Code and data for MedQA☆255Updated 2 years ago
- Medical Hallucination in Foundation Models and Their Impact on Healthcare (2025)☆46Updated 2 weeks ago
- Medical reasoning using large language models☆85Updated last year