nlpie-research / Compact-Biomedical-TransformersLinks
This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in the paper "On The Effectiveness of Compact Biomedical Transformers"
☆19Updated last year
Alternatives and similar repositories for Compact-Biomedical-Transformers
Users that are interested in Compact-Biomedical-Transformers are comparing it to the libraries listed below
Sorting:
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆155Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆98Updated last year
- ☆63Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆163Updated 4 years ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 8 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated 2 years ago
- auto icd coding with prompt☆49Updated last year
- ☆25Updated 2 years ago
- BioELECTRA☆50Updated 4 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 11 months ago
- ☆101Updated 3 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- ☆67Updated 3 years ago
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆32Updated 3 years ago
- Pre-trained Language Model for Biomedical Question Answering☆125Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆63Updated 3 years ago
- Recognize bio-medical entities from a text corpus☆131Updated 2 years ago
- PubMed PICO Element Detection Dataset☆57Updated 7 years ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆74Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆213Updated 2 years ago
- Code for the emrQA question answering dataset☆152Updated 4 years ago
- ☆52Updated 4 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆46Updated 5 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆51Updated 4 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆178Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 5 years ago