Machine-Learning-for-Medical-Language / cnlp_transformers
Transformers for Clinical NLP
☆24Updated this week
Alternatives and similar repositories for cnlp_transformers:
Users that are interested in cnlp_transformers are comparing it to the libraries listed below
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?☆15Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- ☆98Updated 3 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Code for the emrQA question answering dataset☆148Updated 3 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- ☆38Updated 3 years ago
- ☆59Updated last year
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- A Serverless Text Annotation Tool for Corpus Development☆55Updated 2 months ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆28Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- PubMed PICO Element Detection Dataset☆56Updated 6 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Updated last year
- ☆18Updated last year
- ☆25Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated this week
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated last month
- Python module to parse UMLS source files☆19Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 5 years ago
- A near real-time named-entity recognizer☆59Updated 11 months ago
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆30Updated 2 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 6 months ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- EMNLP 2022: Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework☆10Updated 8 months ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated 11 months ago