Machine-Learning-for-Medical-Language / cnlp_transformers
Transformers for Clinical NLP
☆23Updated 2 weeks ago
Alternatives and similar repositories for cnlp_transformers:
Users that are interested in cnlp_transformers are comparing it to the libraries listed below
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- Weakly supervised medical named entity classification☆70Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆59Updated 2 years ago
- A Serverless Text Annotation Tool for Corpus Development☆55Updated last month
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- ☆96Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 8 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆75Updated 3 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated this week
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆61Updated 3 years ago
- Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?☆14Updated 3 years ago
- auto icd coding with prompt☆48Updated 9 months ago
- ☆26Updated 4 years ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- SciFive: a text-text transformer model for biomedical literature☆92Updated 8 months ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆35Updated last year
- A collection of papers on automated medical coding from free-texts☆129Updated last month
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- Code for the emrQA question answering dataset☆144Updated 3 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆25Updated last year
- ☆38Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 9 months ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 4 years ago
- ☆25Updated last year
- EMNLP 2022: Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework☆10Updated 5 months ago