whaleloops / KEPTLinks
auto icd coding with prompt
☆49Updated last year
Alternatives and similar repositories for KEPT
Users that are interested in KEPT are comparing it to the libraries listed below
Sorting:
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 3 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated 2 years ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆97Updated last year
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆97Updated last year
- ☆91Updated last year
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated 2 years ago
- CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering☆23Updated 4 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- ☆63Updated 2 years ago
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆31Updated 2 years ago
- Biomedical Question Answering Datasets.☆121Updated 7 months ago
- Dataset and Evaluation Code for the K-QA Benchmark.☆17Updated last year
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆212Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆98Updated last year
- Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]☆19Updated 2 years ago
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆76Updated 2 years ago
- ☆18Updated 3 years ago
- Code for the emrQA question answering dataset☆152Updated 3 years ago
- A collection of papers on automated medical coding from free-texts☆150Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆153Updated 2 years ago
- ☆43Updated 2 years ago
- Medical Question-Answering datasets prepared for the TREC 2017 LiveQA challenge (Medical Task)☆55Updated last year
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023☆53Updated 2 years ago
- A Label Attention Model for ICD Coding from Clinical Text☆70Updated 3 years ago
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)☆18Updated 3 years ago
- PMC-Patients☆102Updated last year
- Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)☆17Updated 5 years ago