Alternatives and similar repositories for docker-4-bioinformatics

Users that are interested in docker-4-bioinformatics are comparing it to the libraries listed below

• waldronlab / TCGAutils
  Toolbox package for organizing and working with TCGA data
  ☆28Updated last month
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆27Updated 7 years ago
• mikelove / deseq2_or_edger
  DESeq2 or edgeR
  ☆22Updated 8 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• csoneson / countsimQC
  countsimQC - Compare characteristic features of count data sets
  ☆28Updated last month
• YuLab-SMU / ReactomePA
  Reactome Pathway Analysis
  ☆43Updated 4 months ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated 7 months ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last month
• carpentries-incubator / bioc-rnaseq
  Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
  ☆23Updated last week
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆25Updated last year
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆37Updated 2 years ago
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆66Updated 2 weeks ago
• stephaniehicks / qsmooth
  Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…
  ☆52Updated 2 years ago
• UMMS-Biocore / debrowser
  Differential Count Data Analysis Toolbox
  ☆61Updated last year
• metaOmics / metaOmics
  Shiny GUI application for genomics meta-analysis
  ☆22Updated 4 years ago
• himelmallick / Tweedieverse
  Differential analysis of multi-omics data based on the Tweedie distribution
  ☆28Updated last year
• dzhang32 / dasper
  Detecting Aberrant Splicing Events from RNA-sequencing data
  ☆16Updated 8 months ago
• crazyhottommy / scripts-general-use
  ☆16Updated 8 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆51Updated 6 months ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆22Updated 2 months ago
• bzhanglab / WebGestaltR
  R package for WebGestalt
  ☆37Updated 4 months ago
• uc-bd2k / GREP2
  GEO RNA-seq Experiments Processing Pipeline
  ☆21Updated 5 years ago
• nsheff / LOLA
  Locus Overlap Analysis: Enrichment of Genomic Ranges
  ☆78Updated 5 years ago
• dsurujon / ShinyOmics
  Exploration of Omics data
  ☆25Updated 4 years ago
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated 2 months ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆28Updated 10 years ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated this week
• hms-dbmi / dseqr
  single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.
  ☆20Updated 10 months ago
• maggiecrow / DEprior
  ☆15Updated 4 years ago
• mozack / vdjer
  V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data
  ☆29Updated 3 years ago