Alternatives and similar repositories for mavehgvs:

Users that are interested in mavehgvs are comparing it to the libraries listed below

• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• VariantEffect / mavetools
  Useful functions for manipulating Multiplex Assay of Variant Effect datasets.
  ☆10Updated last month
• staciawyman / blender
  This BLENDER has been sunsetted
  ☆16Updated 5 months ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• ELELAB / CAncer-bioMarker-Prediction-Pipeline-CAMPP
  The Cancer bioMarker Prediction Pipeline (CAMPP)
  ☆17Updated 4 years ago
• broadinstitute / gene-hints
  Discoverability for gene search
  ☆12Updated 2 years ago
• ding-lab / somaticwrapper
  Detect somatic variants from tumor and normal WGS/WXS data
  ☆15Updated 2 weeks ago
• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• VariantEffect / MaveReferences
  Table of Multiplexed Assay of Variant Effect (MAVE) studies
  ☆11Updated 2 years ago
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆41Updated this week
• aritra90 / TeraPCA
  TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA featur…
  ☆14Updated 2 years ago
• EBISPOT / GWAS_Catalog-workshop
  Training material for the GWAS Catalog REST API workshop
  ☆13Updated last year
• DataBiosphere / terra-docker
  ☆27Updated this week
• TRON-Bioinformatics / neofox
  Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
  ☆29Updated last month
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆24Updated last year
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• Mangul-Lab-USC / imrep
  ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
  ☆12Updated 11 months ago
• kmayerb / tcrdist2
  Quantifiable predictive features define epitope-specific T cell receptor repertoires
  ☆13Updated 2 years ago
• arosenfeld / immunedb
  ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
  ☆21Updated 9 months ago
• jananiravi / compbio-gists
  Computational Biology & Bioinformatics Resources
  ☆14Updated last year
• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆25Updated last year
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆19Updated 8 months ago
• IEDB / ONTIE
  Ontology for Immune Epitopes
  ☆13Updated last month
• cancerdatasci / demeter
  Deconvolution of seed effects from gene effects in large scale RNAi screens
  ☆10Updated 6 years ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• BioPAX / paxtoolsr
  The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) mole…
  ☆10Updated 2 years ago
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated 2 years ago
• reimandlab / ActiveDriverDB
  ActiveDriverDB
  ☆12Updated last year
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆16Updated 2 years ago