JTFouquier / explanaLinks
Workflow to generate interactive feature selection report for cross-sectional or longitudinal studies
☆10Updated 5 months ago
Alternatives and similar repositories for explana
Users that are interested in explana are comparing it to the libraries listed below
Sorting:
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Updated 5 years ago
- Python toolbox for multi-omics data mapping and analysis☆25Updated 2 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆13Updated 4 years ago
- Network annotation visualization☆18Updated 4 months ago
- 16S pipeline using qiime2 created with snakemake☆12Updated 2 weeks ago
- ☆25Updated 5 years ago
- Python module to analyse CRISPR-based libraries☆13Updated 4 years ago
- ☆21Updated last year
- R tool to analyse and integrate multiple -omics data☆14Updated 4 months ago
- DeepWAS: Directly integrating regulatory information into GWAS using machine learning☆17Updated 6 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Updated last month
- Integrating influenza antigenic dynamics with molecular evolution☆12Updated 10 years ago
- An R package for Partial Least Squares analysis and plotting for (high dimensional) compositional data☆20Updated 3 years ago
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- PaNeV: an R package for a pathway-based network visualization☆10Updated last month
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆23Updated last year
- Creating package to draw proteins from Uniprot API☆35Updated last year
- ☆13Updated 2 years ago
- PTa Analysis TOolkit☆13Updated 2 weeks ago
- RNAsik - more than just a pipeline☆13Updated last year
- A tutorial for pathway visualization using tidyverse, igraph, and ggraph☆60Updated 11 months ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆35Updated last year
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Updated last month
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Updated 3 years ago
- ☆20Updated 4 years ago
- ☆29Updated 11 months ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Best practices for applying machine learning to bacterial 16S rRNA gene sequencing data☆31Updated 5 years ago
- ** Blood metabolome predicts gut microbiome α-diversity in humans**☆24Updated 6 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆20Updated 4 years ago