Alternatives and similar repositories for SOAR

Users that are interested in SOAR are comparing it to the libraries listed below

• AI4SCR / ATHENA
  ☆35Updated last week
• BodenmillerGroup / SCPathology_publication
  The Single-Cell Pathology Landscape of Breast Cancer
  ☆27Updated 6 years ago
• jasonHKU0907 / FutureHealthProteomicPrediction
  ☆46Updated last year
• gevaertlab / sequoia-pub
  SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
  ☆49Updated 7 months ago
• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆56Updated 3 years ago
• qalid7 / compath
  deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…
  ☆52Updated 5 years ago
• ratschlab / DeepSpot
  DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images
  ☆63Updated last month
• suinleelab / contrastiveVI
  ☆60Updated last year
• SBIlab / NetBio
  ☆34Updated 3 years ago
• nadavbra / ukbb_parser
  A Python module for loading phenotypic and genetic data from the UK Biobank.
  ☆38Updated 2 months ago
• jasonHKU0907 / DementiaProteomicPrediction
  ☆49Updated 11 months ago
• googlebaba / StableCox
  Nature machine intelligence-Stable Cox Regression for Survival Analysis under Distribution Shifts
  ☆22Updated 9 months ago
• cantinilab / momix-notebook
  ☆66Updated 2 years ago
• NCICCGPO / gdan-tmp-models
  Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.
  ☆30Updated 9 months ago
• huangzhii / SALMON
  SALMON: Survival Analysis Learning with Multi-Omics Neural Networks
  ☆66Updated last year
• rootchang / LORIS
  LORIS: A LOgistic Regression-based Immunotherapy-response Score
  ☆14Updated last year
• romain-lopez / DestVI-reproducibility
  Reproducing the experiments of the DestVI paper
  ☆22Updated 3 years ago
• isb-cgc / Community-Notebooks
  ☆14Updated 4 months ago
• whwanglab / PDAC
  ☆13Updated 3 years ago
• FridleyLab / spatialGE
  Methods for visualization and analysis of spatially-resolved gene expression
  ☆21Updated 5 months ago
• QuKunLab / MultiomeBenchmarking
  ☆51Updated 10 months ago
• kpcoleman / miso
  ☆33Updated last year
• Su-informatics-lab / DSTG
  Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
  ☆39Updated 3 years ago
• LieberInstitute / HumanPilot
  Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
  ☆91Updated last year
• ddb-qiwang / S2Omics
  ☆22Updated last month
• rendeirolab / LazySlide
  Accessible and interoperable whole slide image analysis
  ☆175Updated 2 weeks ago
• Henrik86 / Topological-tumour-graphs
  ☆11Updated 6 years ago
• QihuangZhang / CeLEry
  CeLEry: cell location recovery in single-cell RNA sequencing
  ☆37Updated 11 months ago
• Zaoqu-Liu / MOFS
  Multimodality Fusion Subtyping (Nature Communications)
  ☆30Updated 9 months ago
• huBioinfo / CytoCommunity
  A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from …
  ☆25Updated 3 weeks ago