Alternatives and similar repositories for UKB_PWAS

Users that are interested in UKB_PWAS are comparing it to the libraries listed below

• MGormley12 / metabolic_trait_hnc_mr
  The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis
  ☆12Updated 2 years ago
• alicerosecarter / MediationMR
  Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation ana…
  ☆12Updated 5 years ago
• JamesZ-Yang / MR-BMA
  ☆11Updated 2 years ago
• FritscheLab / createUKBphenome
  Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank
  ☆33Updated 2 years ago
• eleanorsanderson / MediationMR
  ☆26Updated 5 years ago
• lb664 / MR2
  Bayesian multi-response Mendelian randomisation
  ☆20Updated 9 months ago
• machiela-lab / UKBBcleanR
  Prepare electronic medical record data from the UK Biobank for time-to-event analyses
  ☆15Updated 4 months ago
• fernandam93 / epiclocks_cancer
  This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…
  ☆14Updated 4 years ago
• Rick-Chen-PKU / Depression_GI
  This code relates to the project titled "Depression and risk of gastrointestinal disorders: a comprehensive two-sample Mendelian randomiz…
  ☆20Updated 2 years ago
• sritchie73 / ukbnmr
  Tools for processing Nightingale NMR biomarker data in UK Biobank
  ☆48Updated last month
• alhenry / cvd1-hf
  Analysis code for Olink CVD1 - HF analysis
  ☆14Updated last year
• rcrichmond / smoking_alcohol_headandneckcancer
  Multivariable Mendelian randomization to investigate the independent effects of smoking and alcohol on risk of head and neck cancer
  ☆34Updated 5 years ago
• hdg204 / UKBB
  An ensemble of functions for use analysing the UKBB records on DNA Nexus
  ☆15Updated 2 months ago
• gagelo01 / GagnonMR
  ☆54Updated last year
• mglev1n / mrbma
  Mendelian Randomization Bayesian Model Averaging
  ☆22Updated 2 years ago
• XixianRuan / smoking_gi
  R codes and data for 'Smoking, Alcohol consumption, and 24 Gastrointestinal Diseases: Mendelian Randomization Analysis'
  ☆11Updated 2 years ago
• n-mounier / MRlap
  R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples
  ☆67Updated last year
• jrs95 / nlmr
  Non-linear Mendelian randomization
  ☆56Updated 2 years ago
• jonathanklmak / Metabolomics_frailty
  Unraveling the metabolic underpinnings of frailty using multicohort observational and Mendelian randomization analyses
  ☆13Updated 2 years ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆42Updated last year
• MarioGuCBMR / MR_Physical_Activity_BMI
  Code to run Mendelian Randomization Analysis
  ☆10Updated 3 years ago
• shaoyoucheng / nhanesR
  ☆26Updated 4 years ago
• verena-zuber / demo_AMD
  ☆35Updated 9 months ago
• NightingaleHealth / ukb-nightingale-biomarker-atlas
  Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".
  ☆18Updated 3 years ago
• ACDBio / AutoMR
  An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…
  ☆33Updated 3 years ago
• lindgrengroup / obesity_femrepr_MR
  Code for analyses in "Obesity and risk of female reproductive disorders: A Mendelian Randomisation Study"
  ☆16Updated last year
• UK-Biobank / UKB-RAP-Notebooks-Access
  UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).
  ☆139Updated 6 months ago
• jasonHKU0907 / DementiaProteomicPrediction
  ☆48Updated 11 months ago
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆39Updated last year
• jean997 / cause
  R package for CAUSE
  ☆56Updated 2 years ago