Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation analyses
☆13May 11, 2020Updated 5 years ago
Alternatives and similar repositories for MediationMR
Users that are interested in MediationMR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆26Dec 1, 2020Updated 5 years ago
- Code for analyses in "Obesity and risk of female reproductive disorders: A Mendelian Randomisation Study"☆16Dec 19, 2024Updated last year
- ☆13Nov 30, 2018Updated 7 years ago
- Downstream analysis for the paper "Metabolomic profiles predict individual multi-disease outcomes in the UK Biobank cohort".☆14Sep 27, 2025Updated 7 months ago
- Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…☆14Jun 10, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆23May 11, 2023Updated 2 years ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Nov 18, 2023Updated 2 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Sep 2, 2021Updated 4 years ago
- Download UKB bulk data☆12Jul 27, 2020Updated 5 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 2 weeks ago
- Analysis on stop reasons☆10Jun 17, 2024Updated last year
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆62Mar 31, 2023Updated 3 years ago
- ☆41Dec 20, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A package for MR Practical Sessions☆20Apr 15, 2020Updated 6 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- Software implementing the Latent Causal Variable Model☆65Jun 30, 2020Updated 5 years ago
- R package for creating simulated summary statistics and testing MR methods☆12Sep 2, 2020Updated 5 years ago
- Supports epidemiological analyses using compositional exposure variables☆10Oct 10, 2025Updated 6 months ago
- Analysis code for Olink CVD1 - HF analysis☆15Aug 14, 2024Updated last year
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated last week
- ☆15Sep 9, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This is a read-only mirror of the CRAN R package repository. metafor — Meta-Analysis Package for R. Homepage: https://www.metafor-proje…☆10Apr 26, 2026Updated last week
- GENetic Effect-Size distribution Inference from Summary-level data☆15Sep 6, 2020Updated 5 years ago
- Code for the paper 'Identifying Modifiable Risk Factors and Their Joint Effect on Dementia Prevention'☆16Mar 9, 2023Updated 3 years ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆42Oct 31, 2025Updated 6 months ago
- An R package for testing high-dimensional covariance matrices☆11Oct 5, 2017Updated 8 years ago
- Helper functions for UK Biobank data☆13Dec 6, 2021Updated 4 years ago
- Prepare electronic medical record data from the UK Biobank for time-to-event analyses☆16Sep 10, 2025Updated 7 months ago
- ☆12Nov 1, 2022Updated 3 years ago
- Pair-wise conditional analysis and colocalisation☆41May 2, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Separating the direct effects of risk factors for atherosclerotic cardiovascular disease from those mediated by type 2 diabetes☆18Mar 12, 2023Updated 3 years ago
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 6 years ago
- Flexible mediation analysis using natural effect models in R☆25Jun 22, 2023Updated 2 years ago
- an innovative strategy for missense mutant protein structures prediction based on AlphaFold2 and Molecular Dynamics Simulation☆13May 21, 2024Updated last year
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆18Jul 15, 2022Updated 3 years ago
- Deep Kernel Survival Analysis and Subject-Specific Survival Time Prediction Intervals☆13Oct 1, 2021Updated 4 years ago
- Deep learning prognosis for lung cancer☆13Apr 2, 2019Updated 7 years ago