Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation analyses
☆13May 11, 2020Updated 6 years ago
Alternatives and similar repositories for MediationMR
Users that are interested in MediationMR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…☆14Jun 10, 2022Updated 4 years ago
- ☆13Nov 30, 2018Updated 7 years ago
- Downstream analysis for the paper "Metabolomic profiles predict individual multi-disease outcomes in the UK Biobank cohort".☆15Jul 14, 2026Updated last month
- ☆23May 11, 2023Updated 3 years ago
- Download UKB bulk data☆11Jul 27, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆27Sep 2, 2021Updated 5 years ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆27Nov 18, 2023Updated 2 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 3 years ago
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 4 months ago
- A package for MR Practical Sessions☆20Apr 15, 2020Updated 6 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- ☆40Dec 20, 2021Updated 4 years ago
- Supports epidemiological analyses using compositional exposure variables☆10Oct 10, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Flexible mediation analysis using natural effect models in R☆25Jun 22, 2023Updated 3 years ago
- UKB Weekend Warrior MVPA Analysis☆13Apr 28, 2025Updated last year
- Code for the paper 'Identifying Modifiable Risk Factors and Their Joint Effect on Dementia Prevention'☆16Mar 9, 2023Updated 3 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆41Nov 3, 2025Updated 10 months ago
- ☆201Dec 24, 2023Updated 2 years ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆42Oct 31, 2025Updated 10 months ago
- An R package for testing high-dimensional covariance matrices☆11Oct 5, 2017Updated 8 years ago
- Tools to download datafiles from the Cochrane Library of Systematic Reviews☆13May 22, 2020Updated 6 years ago
- Pair-wise conditional analysis and colocalisation☆43May 2, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Separating the direct effects of risk factors for atherosclerotic cardiovascular disease from those mediated by type 2 diabetes☆17Mar 12, 2023Updated 3 years ago
- ☆16Sep 9, 2024Updated last year
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 7 years ago
- ☆12Nov 1, 2022Updated 3 years ago
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆19Jul 15, 2022Updated 4 years ago
- This repository is a tutorial about survival analysis based on advanced machine learning methods including Random Forest, Gradient Boosti…☆32Dec 6, 2018Updated 7 years ago
- Public code from paper: 'Towards a decision support tool for intensive care discharge: machine learning algorithm development using elect…☆10Jun 4, 2019Updated 7 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated 4 months ago
- Prepare electronic medical record data from the UK Biobank for time-to-event analyses☆16Sep 10, 2025Updated 11 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Deep Kernel Survival Analysis and Subject-Specific Survival Time Prediction Intervals☆14Oct 1, 2021Updated 4 years ago
- Deep learning prognosis for lung cancer☆13Apr 2, 2019Updated 7 years ago
- Bioconductor package to characterize, analyze and integrate exposome with omic and disease data☆20May 11, 2026Updated 3 months ago
- Time capsule for burden of proof paper☆16Jul 13, 2026Updated last month
- Analysis code for Olink CVD1 - HF analysis☆15Aug 14, 2024Updated 2 years ago
- ☆20Jan 8, 2024Updated 2 years ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Mar 23, 2024Updated 2 years ago