☆13Jan 4, 2026Updated 9 months ago
Alternatives and similar repositories for KaMRaT
Users that are interested in KaMRaT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- REINDEER REad Index for abuNDancE quERy☆57Jul 6, 2025Updated last year
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Identify differentially expressed k-mers between RNA-Seq datasets☆11Mar 1, 2021Updated 5 years ago
- A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers☆22Nov 22, 2019Updated 6 years ago
- gapped-kmer based whole genome alignment software☆11Jun 11, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Sep 18, 2026Updated last month
- ☆15Mar 18, 2016Updated 10 years ago
- modular k-mer count matrix and Bloom filter construction for large read collections☆90Sep 18, 2026Updated last month
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Oct 15, 2018Updated 8 years ago
- online variation graph induction☆12Oct 21, 2025Updated last year
- Zero-Inflated (Wilcoxon and Kruskal–Wallis) Rank Test☆12Mar 6, 2026Updated 7 months ago
- A prototype Matrix<->Hangouts appservice written in Python 3.6 using asyncio.☆12Mar 1, 2018Updated 8 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆20Aug 9, 2023Updated 3 years ago
- Hypothesis Testing in Rust, with Python bindings☆21Sep 13, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated 2 years ago
- C++ Unit Benchmarking and Testing Library☆10Feb 25, 2015Updated 11 years ago
- ☆14Feb 28, 2025Updated last year
- A flexible framework for nucleosome profiling of cell-free DNA☆32Jul 27, 2023Updated 3 years ago
- Generate an enhanced VCF files from ClinVar XML Full releases☆17Jul 21, 2026Updated 3 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆21Dec 20, 2023Updated 2 years ago
- Distribution repository for mlpack Go bindings☆13Jun 17, 2026Updated 4 months ago
- Fast and accurate set similarity estimation via containment min hash☆41Jul 19, 2024Updated 2 years ago
- Variant Effect Prediction for Python☆16Apr 5, 2017Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Sources to www.mlpack.org.☆13Jun 19, 2026Updated 4 months ago
- A C++ Framework for Evolutionary Single-Objective Optimization Benchmarking☆11Sep 29, 2026Updated last month
- extract MSAs from genome variation graphs☆34Mar 24, 2026Updated 7 months ago
- a tool for summarizing and integrating gene-set analysis results☆18Aug 14, 2024Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆26May 30, 2023Updated 3 years ago
- Fast algorithms for GLM-PCA.☆19Mar 12, 2025Updated last year
- An experimental tool to estimate the similarity between all pairs of contigs☆41Apr 12, 2021Updated 5 years ago
- A novel method for sequence similarity estimation☆27Mar 23, 2024Updated 2 years ago
- Full GNU Fortran compatibility for Apple's vecLib BLAS/LAPACK☆17Feb 21, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Sources to www.mlpack.org/gsocblog☆11Aug 27, 2020Updated 6 years ago
- ggRibo: Ribo-seq periodicity and other single-nucleotide resolution visualizer☆14Jul 17, 2026Updated 3 months ago
- A header-only C++ redesign of ARPACK using the Armadillo library☆12May 17, 2016Updated 10 years ago
- Long read aligner for cyclic and acyclic pangenome graphs☆41Dec 20, 2023Updated 2 years ago
- Smart and Accurate Polishing of Phased Haplotypes Integrating Read Enhancements (SAPPHIRE)☆11Mar 21, 2026Updated 7 months ago
- Official Code Repositiry for "RaDeR: Reasoning-aware Dense Retrieval Models" accepted at Main Conference EMNLP 2025☆18Jun 23, 2025Updated last year
- ☆14Updated this week