SynBioHub / synbiohubLinks
Web application enabling users and software to browse, upload, and share synthetic biology designs
β79Updated this week
Alternatives and similar repositories for synbiohub
Users that are interested in synbiohub are comparing it to the libraries listed below
Sorting:
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ64Updated 8 months ago
- π¨ Python library to plot multi-part genetic constructsβ25Updated 9 months ago
- A route planner for DNA assemblyβ36Updated 8 months ago
- A versatile DNA sequence optimizerβ262Updated 3 months ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)β35Updated 7 years ago
- cameo - computer aided metabolic engineering & optimizationβ124Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.orgβ68Updated last month
- A Python framework for structural systems biologyβ109Updated 5 years ago
- Codon usage tables in code-friendly format + Python bindingsβ42Updated 8 months ago
- A pure Python implementation of the SBOL standard.β22Updated 11 months ago
- Metabolic Engineering Workbenchβ41Updated last year
- The BiGG Models website serverβ88Updated 6 years ago
- General low-level APIβ50Updated 3 years ago
- π€ Python biolab automation library: parsers, report generators, picklist simulators, and moreβ46Updated 8 months ago
- Coral, a library and framework for specifying synthetic biology design processes.β34Updated 3 years ago
- D3.js based visualizations of cobrapy metabolic modelsβ50Updated 5 years ago
- SBOL Designer Projectβ31Updated 4 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layoutsβ80Updated this week
- iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importinβ¦β63Updated last month
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desigβ¦β61Updated 10 years ago
- Git repository for FASTA36 sequence comparison softwareβ128Updated 2 months ago
- An RNA manipulation library.β56Updated last year
- A BioJS viewer for protein sequence featuresβ53Updated 3 years ago
- Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt projectβ119Updated last year
- The reference implementation of the SBOL Visual standardβ37Updated 2 years ago
- nucleic acid foldingβ110Updated 5 months ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApyβ48Updated last month
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloningβ¦β215Updated this week
- Create force-directed graphs of RNA secondary structures.β110Updated 5 years ago
- Find common blocks and differences between DNA sequencesβ42Updated 3 months ago