Hummingbird: Efficient Performance Prediction for Executing Genomic Applications in the Cloud: https://doi.org/10.1093/bioinformatics/btab161
☆20Jul 19, 2024Updated last year
Alternatives and similar repositories for Hummingbird
Users that are interested in Hummingbird are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A proof of concept daisy-chaining Nextflow workflows☆31Mar 10, 2026Updated last month
- an example of building up a targets analysis for -omics data☆12Jun 23, 2023Updated 2 years ago
- A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.☆10Dec 1, 2024Updated last year
- Galaxy on AWS Guidance provides all the infrastructure components required to run Galaxy in the cloud and are preconfigured with industry…☆18Feb 10, 2025Updated last year
- MemVerge Netflow Plugin☆16Jun 24, 2025Updated 9 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13Apr 5, 2024Updated 2 years ago
- Datastores for reads, not your papa's FASTQ files.☆11Jul 28, 2023Updated 2 years ago
- nf-test utility functions☆12Mar 5, 2026Updated last month
- snakemake grammar for tree-sitter, based on tree-sitter-python☆12Sep 18, 2025Updated 6 months ago
- 1-Click Cluster Deployment with AWS ParallelCluster☆30Sep 23, 2022Updated 3 years ago
- Central repository for the VICC metakb web application☆15Apr 9, 2026Updated last week
- Minimal Viable Identifier☆14Jan 21, 2022Updated 4 years ago
- Snakemake module for the snpArcher pipeline for population size change inference.☆10Nov 12, 2024Updated last year
- An awesome tool to visualize snakemake rule graphs☆30Mar 12, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆16Aug 25, 2025Updated 7 months ago
- Total Perspective Vortex provides an installable set of dynamic rules for the Galaxy application that can route entities (Tools, Users, R…☆16Updated this week
- SvelteJS + fastapi + docker-compose (with mongodb and material ui support)☆17Jan 26, 2026Updated 2 months ago
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Jun 27, 2025Updated 9 months ago
- Partial reimplementation of bcftools for VCF Zarr☆23Apr 1, 2026Updated 2 weeks ago
- A mono-repository containing many tools and libraries to spark innovation☆29Nov 6, 2024Updated last year
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆17Sep 6, 2025Updated 7 months ago
- Algorithm to detect germline and de novo transposon insertions☆34Aug 14, 2025Updated 8 months ago
- FM-index for full-text search☆20Nov 20, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!☆18Updated this week
- ☆19Mar 29, 2023Updated 3 years ago
- Generate a random string to use in your CloudFormation templates☆15Dec 29, 2016Updated 9 years ago
- ☆10Dec 17, 2025Updated 3 months ago
- A post-mapping authentication toolkit for ancient metagenomics☆19Mar 30, 2026Updated 2 weeks ago
- Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆12Sep 30, 2024Updated last year
- ☆41Dec 31, 2025Updated 3 months ago
- ☆14Apr 22, 2022Updated 3 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Fraser Lab website☆40Apr 6, 2026Updated last week
- CSI driver for CernVM-FS☆25Feb 11, 2026Updated 2 months ago
- Nextflow runs monitoring and organisation UI☆77Sep 20, 2024Updated last year
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- SNP-Assisted SV Calling and Phasing Using ONT☆25Jul 9, 2023Updated 2 years ago
- Biological Sequence Substitution Models for Julia☆17Apr 23, 2023Updated 2 years ago
- ☆14Jul 5, 2022Updated 3 years ago