mcmero / labarchives-pyLinks
A python wrapper for interacting with the LabArchives API.
☆10Updated 3 years ago
Alternatives and similar repositories for labarchives-py
Users that are interested in labarchives-py are comparing it to the libraries listed below
Sorting:
- A Github action for running a Snakemake workflow☆58Updated 2 months ago
- a minimal, scriptable genome browser for python☆51Updated 8 months ago
- Snakemake workflow management system and CLI generation tool☆59Updated 2 months ago
- Container class to represent genomic locations and support genomic analysis☆25Updated this week
- Monitor computational workflows in real time☆74Updated last year
- Documentation for PEP specification and all PEPkit software☆10Updated last month
- Bayesian Inferential Regression for Differential Microbiome Analysis☆22Updated last year
- Making Snakemake workflows into full-fledged command line tools since 1999.☆52Updated 7 years ago
- ☆17Updated last year
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 6 years ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- ☆31Updated 3 years ago
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆37Updated 2 weeks ago
- Build and maintain multiple custom conda environments all in one place.☆39Updated 9 months ago
- nf-core/references is a bioinformatics pipeline that build references, for multiple use cases☆18Updated last month
- A Nextflow pipeline to identify quality control issues with new sequencing data.☆28Updated 2 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- Documentation of the Snakemake-Profiles project.☆54Updated 3 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆45Updated 2 months ago
- This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many p…☆34Updated 3 years ago
- Malleable All-seeing Journal Of Research Artifacts☆36Updated 2 years ago
- Nextflow Tower CLI tool☆50Updated 3 weeks ago
- Template for building a small workflow in Nextflow☆17Updated 3 years ago
- Access nextflow variables from python scripts or notebooks☆20Updated 4 years ago
- A job submitter for Portable Encapsulated Projects☆22Updated 5 months ago
- bedtools-like functionality for interval sets in rust☆53Updated 3 weeks ago
- A proof of concept daisy-chaining Nextflow workflows☆26Updated last week
- distance based phylogenetic placement☆27Updated last year
- Simple pure Python SAM parser and objects for working with SAM records☆64Updated 3 years ago
- SQL support plugin for Nextflow☆32Updated 2 weeks ago