Augmented-Nature / AlphaFold-MCP-ServerLinks
A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set of tools and resources for protein structure prediction analysis.
☆27Updated 4 months ago
Alternatives and similar repositories for AlphaFold-MCP-Server
Users that are interested in AlphaFold-MCP-Server are comparing it to the libraries listed below
Sorting:
- A comprehensive Model Context Protocol (MCP) server for accessing the PubChem chemical database. This server provides access to over 110 …☆25Updated 4 months ago
- In-house inpainting pipeline (Rfdiffusion>ProteinMPNN>AF2)☆16Updated last year
- A comprehensive Model Context Protocol (MCP) server providing advanced access to the ChEMBL chemical database.☆68Updated 4 months ago
- MCP server that enables language models to interact with RDKit through natural language☆28Updated 2 weeks ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆30Updated last year
- ☆84Updated last month
- This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Li…☆14Updated 5 months ago
- Benchmark for LLM-based Agents in Computational Biology☆60Updated 3 weeks ago
- DrugHIVE: Structure-based drug design with a deep hierarchical generative model☆105Updated 11 months ago
- AutoML system for building trustworthy peptide bioactivity predictors☆34Updated 3 weeks ago
- A model-context-protocol server for molecules.☆83Updated 6 months ago
- 🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-based metabolomics data mining.☆21Updated last month
- Build PharMeBINet from different sources.☆20Updated last week
- Reinforcement Learning based bioretrosynthesis tool☆51Updated 6 months ago
- Top open source software from the top 50 pharmaceutical companies☆66Updated last year
- AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…☆23Updated 3 weeks ago
- ☆47Updated 6 months ago
- FuncFetch workflow scripts☆13Updated 4 months ago
- Deep learning tools for peptide substrate prediction and generation☆19Updated last month
- Large language models as universal biomedical simulators☆20Updated last year
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆26Updated 2 weeks ago
- One protein is all you need☆45Updated this week
- NVIDIA BioNeMo blueprint for generative AI-based virtual screening☆74Updated 3 months ago
- [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.☆119Updated 3 weeks ago
- Plugin for folding sequences directly in PyMOL☆27Updated 2 months ago
- GUI for Boltz☆27Updated 4 months ago
- Efficient manipulation of protein structures in Python☆58Updated last month
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆63Updated last month
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 5 months ago
- ☆22Updated last week