saviochan / Deeplabcut-OpenFieldArena
A Deeplabcut network trained to label mice in open field arena with topdown view
☆11Updated 4 years ago
Alternatives and similar repositories for Deeplabcut-OpenFieldArena:
Users that are interested in Deeplabcut-OpenFieldArena are comparing it to the libraries listed below
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 5 months ago
- R Scripts to analyze deep lab cut point data and related data☆66Updated 2 years ago
- Fiber photometry analysis☆22Updated 3 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- Fiber Photometry Modular Analysis Tool Suite☆36Updated 3 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆72Updated 3 weeks ago
- Registration of cells across sessions.☆73Updated 7 months ago
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- Free, platform independent, behavior tracking software.☆126Updated 8 months ago
- A codebase for tracking laboratory mice in videos☆10Updated 5 months ago
- Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )☆18Updated 5 months ago
- ☆19Updated last year
- Open-source stereotaxic coordinator☆15Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Histology processing☆65Updated 2 weeks ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆55Updated 3 weeks ago
- Algorithm for automated source extraction from 1P data☆21Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆54Updated last year
- pyqt5 dependent applications for IBL sessions☆26Updated last week
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated 2 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆97Updated 3 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated 3 weeks ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated 3 weeks ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆86Updated 4 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated last month
- A curated list of awesome Neuropixels resources.☆94Updated last month
- NEW v1.1: https://github.com/dstolz/epsych_v1.1 Epsych is a toolbox for extending Tucker-Davis Technologies hardware and sof…☆15Updated 2 years ago
- Quantify user-defined behaviors.☆74Updated 3 weeks ago