portugueslab / stytraLinks
A modular package to control stimulation and track behaviour
☆47Updated last year
Alternatives and similar repositories for stytra
Users that are interested in stytra are comparing it to the libraries listed below
Sorting:
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆62Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- IBL core shared libraries☆66Updated this week
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆53Updated 8 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Updated 2 weeks ago
- ☆52Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆43Updated 10 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 4 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆47Updated last week
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Browser-based NWB visualization and DANDI exploration☆62Updated last week
- Janelia Animal Behavior Detector☆82Updated 3 months ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆107Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- Python package for analysis of dynamic fluorescence microscopy data☆103Updated 6 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Live Mouse Tracker analysis☆35Updated last week
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- Distributed behavioral experiments☆95Updated 11 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- IaC codebase for the NeuroCAAS Platform☆39Updated 2 years ago
- Code for Functional Mixed Models for Fiber Photometry☆15Updated 6 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆43Updated last year
- A Python interface to access neuroanatomical atlases☆172Updated this week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆83Updated last year