Helps plan where to put things in brains
☆11Nov 1, 2023Updated 3 years ago
Alternatives and similar repositories for probeplanner
Users that are interested in probeplanner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆13Nov 26, 2020Updated 5 years ago
- Tools for packaging atlases for use with BrainGlobe☆13Feb 21, 2024Updated 2 years ago
- Visualise brainreg registration output☆11Nov 20, 2021Updated 4 years ago
- Visualisation and exploration of brain atlases☆10Aug 21, 2020Updated 6 years ago
- ☆11Sep 16, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Automated 3D brain registration in napari with support for multiple species and atlases.☆17Jan 5, 2024Updated 2 years ago
- ☆10Dec 7, 2023Updated 2 years ago
- Anatomical space conventions made easy.☆13Updated this week
- (Meta-)package repository for BrainGlobe's Python tools for computational neuroanatomy.☆11Updated this week
- NIU website on common software problems and their troubleshooting☆11Jul 14, 2026Updated 3 months ago
- ☆11Mar 15, 2023Updated 3 years ago
- Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.☆13Updated this week
- Shared general purpose tools for the BrainGlobe project☆13Updated this week
- General information, resources and dicussions for the BrainGlobe project.☆12Feb 21, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Loading and saving of image data.☆11Feb 9, 2024Updated 2 years ago
- ☆12Oct 21, 2025Updated last year
- A Python package to download neuronal morphologies☆18Updated this week
- Build unbiased anatomical templates from individual images☆14Nov 2, 2026Updated last week
- Pose estimation scripts to be run on the SWC HPC cluster☆12Dec 5, 2023Updated 2 years ago
- brainglobe.info website☆14Updated this week
- Read and write files from the BrainGlobe neuroanatomy suite☆16Updated this week
- Fancier logging with python.☆17Updated this week
- Derotate images acquired via multiphoton calcium imaging☆17Nov 2, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆13Dec 11, 2020Updated 5 years ago
- Efficient cell detection in large images using cellfinder in napari☆23Jan 5, 2024Updated 2 years ago
- Re-usable GitHub Action scripts☆14Nov 2, 2026Updated last week
- Home website of the Neuroinformatics Unit☆19Oct 26, 2026Updated 2 weeks ago
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- A tool for translating between common coordinate frameworks using deformation matrices.☆17Oct 15, 2026Updated 3 weeks ago
- A repository for our participation in Google Summer of Code☆15Apr 15, 2025Updated last year
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆27Jul 14, 2026Updated 3 months ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆24Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Segmentation of anatomical structures in a common coordinate space☆38Updated this week
- A framework for benchmarking pose estimation and point tracking methods on animal behaviour videos.☆13Updated this week
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆40Nov 24, 2023Updated 2 years ago
- Manage annotation data for your animal behaviour analysis☆32Nov 2, 2026Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆53Nov 2, 2026Updated last week
- Automated and reproducible analysis of multiphoton imaging datasets☆26Oct 27, 2026Updated last week
- A package to manage electrophysiology analysis.☆26Nov 2, 2026Updated last week
Are these results useful?