A flexible Python-based GUI for stereotaxic experiment planning.
☆11Feb 4, 2026Updated 3 weeks ago
Alternatives and similar repositories for CoperniFUS
Users that are interested in CoperniFUS are comparing it to the libraries listed below
Sorting:
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Feb 18, 2026Updated last week
- Anatomical space conventions made easy.☆12Feb 20, 2026Updated last week
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆27Updated this week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated 3 weeks ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆24Jul 4, 2022Updated 3 years ago
- ☆12Updated this week
- Brain flatmaps generation☆11Oct 5, 2022Updated 3 years ago
- Image processing tool focusing on biological applications☆14Jul 18, 2025Updated 7 months ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- Web based Image Viewer developed @ Center for Advanced Imaging [University of Queensland]☆19May 18, 2023Updated 2 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Audio signals noise reduction☆13Dec 27, 2021Updated 4 years ago
- Repository for Nipraxis course textbook☆17Sep 17, 2023Updated 2 years ago
- Index BIDS datasets fast, locally or in the cloud☆21Nov 13, 2025Updated 3 months ago
- GPU-based 3D non-rigid volumetric registration☆43Aug 26, 2025Updated 6 months ago
- FreiPose: A Deep Learning Framework for Precise Animal Motion Capture in 3D Spaces☆18Apr 11, 2022Updated 3 years ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- This repository contains the code used for the paper "Molecular Atlas of the Adult Mouse Brain".☆16Feb 26, 2021Updated 5 years ago
- A draft specification for the nifti-zarr format☆16Dec 5, 2025Updated 2 months ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆17Mar 20, 2025Updated 11 months ago
- ☆58Jan 19, 2026Updated last month
- A python library for advanced lattice light-sheet image analysis☆21Sep 9, 2020Updated 5 years ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Apr 24, 2023Updated 2 years ago
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆18Nov 15, 2021Updated 4 years ago
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆29Feb 16, 2026Updated last week
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Nov 21, 2024Updated last year
- ☆29Oct 22, 2025Updated 4 months ago
- Block-wise operations for large nD volumes☆45Feb 19, 2026Updated last week
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- 3D shape analysis using deep learning☆29Oct 8, 2025Updated 4 months ago
- SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.☆27Oct 11, 2024Updated last year
- Lattice light-sheet post-processing utility.☆30Feb 2, 2026Updated 3 weeks ago
- Threshold independent detection and localization of diffraction-limited spots.☆38Nov 1, 2022Updated 3 years ago
- A python algorithm for tracking cells in 3D deforming organs☆68Nov 13, 2025Updated 3 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- Use ImageJ functionality from napari☆33Jan 2, 2026Updated last month
- A collection of scripts for loading and manipulating Blackrock Microsystems datafiles.☆37Oct 30, 2025Updated 4 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆35Feb 20, 2026Updated last week