Open source code for AlphaFold.
☆22Jan 28, 2022Updated 4 years ago
Alternatives and similar repositories for ParaFold
Users that are interested in ParaFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Improved ab initio protein structure reconstruction☆15Mar 7, 2018Updated 8 years ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆173Feb 25, 2024Updated 2 years ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆20Mar 6, 2024Updated 2 years ago
- Pytorch reimplementation of AlphaFold3☆26May 7, 2026Updated 2 months ago
- Graph Learning of INTER-protein contacts☆10Feb 20, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆33Feb 25, 2024Updated 2 years ago
- ☆12Jun 16, 2023Updated 3 years ago
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆30Jan 17, 2024Updated 2 years ago
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 5 months ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- ☆15Dec 21, 2021Updated 4 years ago
- Analysis of alphafold and colabfold results☆49May 22, 2026Updated 2 months ago
- Fast, sensitive and accurate protein remote homology search on GPUs☆15May 6, 2024Updated 2 years ago
- A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural info…☆11Jul 14, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Deep ResNet-based protein contact prediction☆19Mar 30, 2020Updated 6 years ago
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆20May 5, 2026Updated 2 months ago
- Code for "Learning Harmonic Molecular Representations on Riemannian Manifold", ICLR, 2023☆10Mar 23, 2023Updated 3 years ago
- Ginkgo Antibody Developability 2025 Competition Repo☆34Nov 25, 2025Updated 8 months ago
- This script can clean up the disordered region in the AlphaFold DB structures to adapt it to the molecular docking, extract the sequence …☆15Apr 20, 2023Updated 3 years ago
- Nucleotide-pair encoding of 16S rRNA sequences for host phenotype and biomarker detection☆11Mar 17, 2019Updated 7 years ago
- ViroBLAST standalone package☆16Apr 4, 2024Updated 2 years ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Aug 5, 2021Updated 4 years ago
- ☆46Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- DIAMOND online documentation☆10Sep 2, 2020Updated 5 years ago
- ☆30Aug 8, 2025Updated 11 months ago
- CATH: high-throughput protein structure/function annotations☆12Dec 17, 2019Updated 6 years ago
- Contact Prediction ToolKit☆22Updated this week
- BamDeal: a comprehensive toolkit for bam manipulation☆15Dec 21, 2022Updated 3 years ago
- Design gene specific KASP and CAPS/dCAPS primers for any species☆19Sep 19, 2022Updated 3 years ago
- tutorials for spateo package☆21Dec 25, 2024Updated last year
- Nanopore SimulatION is a tool for simulating an Oxfornd Nanopore Technologies MinION device for bioinformatic development.☆19Nov 30, 2017Updated 8 years ago
- ☆27Feb 16, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆33Jun 1, 2024Updated 2 years ago
- Biomolecular co-folding, binder filtering, and nanobody design☆84Jun 28, 2026Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated 3 months ago
- Align multiple amino acid or nucleotide sequences.☆93Sep 17, 2020Updated 5 years ago
- ☆17Jan 5, 2024Updated 2 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 7 years ago
- ☆316Jun 16, 2026Updated last month