Alternatives and similar repositories for dxda

Users that are interested in dxda are comparing it to the libraries listed below

• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆50Updated 6 years ago
• biocore / tcga
  Microbial analysis in TCGA data
  ☆91Updated last year
• nunofonseca / irap
  integrated RNA-seq Analysis Pipeline
  ☆83Updated 6 years ago
• evolgeniusteam / GMrepoProgrammableAccess
  programmable access to GM repo
  ☆27Updated 2 years ago
• kircherlab / CADD-scripts
  CADD scripts release for offline scoring. For more information about CADD, please visit our website
  ☆85Updated 3 months ago
• ebi-uniprot / ProtVista
  A BioJS viewer for protein sequence features
  ☆51Updated 2 years ago
• bcgsc / pori
  Platform for Oncogenomic Reporting and Interpretation (PORI)
  ☆34Updated last year
• Ensembl / postgap
  Linking GWAS studies to genes through cis-regulatory datasets
  ☆39Updated 2 years ago
• noambar / SerumMetabolomePredictions
  ☆22Updated 4 years ago
• minoh0201 / DeepMicro
  Deep representation learning for disease prediction based on microbiome data
  ☆59Updated 2 years ago
• dnanexus / dx-toolkit
  DNAnexus platform client libraries
  ☆98Updated 2 weeks ago
• dgidb / dgidb
  Rails frontend to The Genome Institute's drug gene interaction database.
  ☆95Updated 3 weeks ago
• gatk-workflows / gatk4-jupyter-notebook-tutorials
  This repository contains Jupyter Notebooks containing GATK Best Practices Workflows
  ☆26Updated 5 years ago
• bhklab / PharmacoGx
  R package to analyze large-scale pharmacogenomic datasets.
  ☆70Updated last week
• ai4nucleome / BioMaster
  ☆66Updated 3 months ago
• YuLab-SMU / GOSemSim
  GO-terms Semantic Similarity Measures
  ☆65Updated 2 weeks ago
• furkanmtorun / gnomad_python_api
  [deprecated] 🧬 Python API to fetch gnomAD data
  ☆22Updated 3 years ago
• sschmeier / genomics
  Sphinx documentation source for a computational genomics tutorial.
  ☆34Updated 4 years ago
• sebriois / biomart
  Python biomart API
  ☆68Updated 2 years ago
• Illumina / PrimateAI
  deep residual neural network for classifying the pathogenicity of missense mutations.
  ☆113Updated 4 years ago
• vagarwal87 / Xpresso
  Predicting gene expression levels from genomic sequences
  ☆54Updated 5 years ago
• bm2-lab / MetaTopics
  ☆12Updated 9 years ago
• shwhalen / targetfinder
  ☆84Updated 4 years ago
• biothings / mygene.info
  MyGene.info: A BioThings API for gene annotations
  ☆128Updated this week
• CompOmics / meta-proteome-analyzer
  MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.
  ☆31Updated 5 years ago
• lehtiolab / proteogenomics-analysis-workflow
  IPAW: a Nextflow workflow for proteogenomics
  ☆28Updated last year
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆31Updated 3 years ago
• pFindStudio / pFind3
  ☆28Updated 7 months ago
• YuLab-SMU / DOSE
  Disease Ontology Semantic and Enrichment analysis
  ☆119Updated 4 months ago
• PharmGKB / PharmCAT
  The Pharmacogenomic Clinical Annotation Tool
  ☆145Updated this week