dnanexus / dxdaLinks
CLI tool to manage the download of large quantities of files from DNAnexus
☆17Updated 2 months ago
Alternatives and similar repositories for dxda
Users that are interested in dxda are comparing it to the libraries listed below
Sorting:
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆42Updated 9 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆50Updated 5 years ago
- Unsupervised correction of gene independent cell responses to CRISPR-cas9☆50Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-…☆103Updated 2 years ago
- Project Manager for NGS data analysis☆31Updated 2 years ago
- Downloader for ENCODE☆32Updated 4 years ago
- ☆48Updated 2 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆28Updated last year
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆74Updated last month
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆82Updated last month
- ARCHS4 RNA-seq processing scripts and web server pages.☆57Updated 4 years ago
- Relative Expression Ordering Analysis (REOA) package☆20Updated 2 years ago
- DNAnexus platform client libraries☆95Updated this week
- A novel pipeline framework to accelerate bioinformatics analysis☆29Updated 2 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆68Updated 3 months ago
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆73Updated 3 weeks ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated 2 weeks ago
- My bioinfo toolbox☆50Updated 4 months ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- integrated RNA-seq Analysis Pipeline☆84Updated 6 years ago
- Python biomart API☆65Updated 2 years ago
- ☆72Updated 4 years ago
- ☆26Updated 9 years ago
- Streamlining SLAM-seq analysis with ultra-high sensitivity☆48Updated last year
- TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/☆36Updated 3 years ago
- ☆117Updated last year
- Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)☆19Updated 3 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆29Updated 6 years ago
- 1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates☆90Updated 5 months ago