Alternatives and similar repositories for repurpose

Users that are interested in repurpose are comparing it to the libraries listed below

• NeilPearson-Lilly / TractaViewer
  ☆11Updated 5 years ago
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆19Updated 11 months ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• seffnet / seffnet
  Network representation learning on drug-target-side effects-indication graphs for side effect prediction
  ☆13Updated 5 years ago
• BZdrazil / Moving_Targets
  Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…
  ☆9Updated 4 years ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆24Updated 4 months ago
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 5 months ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• JonnyTran / OpenOmics
  A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
  ☆33Updated 11 months ago
• krassowski / multi-omics-state-of-the-field
  Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
  ☆28Updated last year
• BaderLab / EPIC
  This is the public repository for the EPIC tool.
  ☆17Updated 2 years ago
• siheming / mspypeline
  Package to analyze Mass Spec Data
  ☆12Updated last year
• gpp-rnd / stringdb
  ☆10Updated last year
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• CCSB-DFCI / HuRI_paper
  Code for the analyses in the human reference interactome paper.
  ☆27Updated 2 years ago
• opentargets-archive / opentargets-py
  Python client for the Open Targets REST API at targetvalidation.org
  ☆25Updated 4 years ago
• GuiltyTargets / guiltytargets
  Target prioritization using network representation learning
  ☆11Updated 3 years ago
• dmis-lab / moable
  Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding
  ☆14Updated last year
• MoseleyBioinformaticsLab / mwtab
  The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…
  ☆12Updated this week
• netlab-ku / pyPARAGON
  PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference
  ☆11Updated 7 months ago
• kgayvert / PrOCTOR
  A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials
  ☆18Updated 5 years ago
• PathwayCommons / factoid
  A project to capture biological pathway data from academic papers
  ☆29Updated 3 months ago
• ChengF-Lab / 2019-nCoV
  Network-based Drug Repurposing for Human Coronavirus
  ☆40Updated 5 years ago
• nstrodt / USMPep
  Major Histocompatibility Complex (MHC) Binding Affinity Prediction
  ☆10Updated 4 years ago
• dhimmel / lincs
  Library of Integrated Cellular Signatures L1000
  ☆31Updated 3 years ago
• dphansti / CORAL
  ☆28Updated 3 years ago
• DataSciBurgoon / aop-ontology
  Adverse Outcome Pathway Ontology
  ☆12Updated last year
• cebel / pyuniprot
  Python package to query and analyse UniProt
  ☆25Updated 4 years ago