Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers
☆17May 7, 2018Updated 7 years ago
Alternatives and similar repositories for repurpose
Users that are interested in repurpose are comparing it to the libraries listed below
Sorting:
- Drug-disease proximity based therapeutic effect screening and analysis☆21Sep 8, 2017Updated 8 years ago
- ☆34Dec 16, 2018Updated 7 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- Data and basic scrubbing of the FDA Adverse Event Reporting System data☆14Aug 1, 2015Updated 10 years ago
- ☆17May 5, 2020Updated 5 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆113Apr 2, 2022Updated 3 years ago
- CardiacProfileR: An R package for extraction and visualisation of heart rate profiles from wearable fitness trackers☆12Jun 10, 2018Updated 7 years ago
- Protein-ligand binding sites prediction toolkits☆21Jan 2, 2019Updated 7 years ago
- PyCTD is a Python software package to query and analyse data from the CTD database☆12Oct 6, 2022Updated 3 years ago
- This is the public repository for the EPIC tool.☆19Aug 3, 2022Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆23Oct 21, 2024Updated last year
- Augmenting a training dataset of the generative diffusion model for molecular docking with artificial binding pockets☆10Aug 5, 2025Updated 7 months ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆28Sep 12, 2023Updated 2 years ago
- Interactive 3D visualization of networks with multiple layers☆34May 21, 2025Updated 10 months ago
- Repository of Jupyter Notebooks on Colab, Binder and Huggingface for Bio, Chemistry and Physics☆13Jul 29, 2023Updated 2 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Jul 1, 2024Updated last year
- C++ lossless and lossy mass spectrometry compression☆14Sep 16, 2021Updated 4 years ago
- Repository for the code associated with the paper Impact of applicability domains by Maxime Langevin et al.☆13Feb 19, 2025Updated last year
- Generative models of chemical data for PaccMann^RL☆13Jun 2, 2023Updated 2 years ago
- Web-based visualization of large, high-dimensional datasets.☆16Dec 2, 2022Updated 3 years ago
- ☆13Jan 23, 2024Updated 2 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated last year
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆28Mar 8, 2021Updated 5 years ago
- Python API for Pharmer☆12Jun 14, 2019Updated 6 years ago
- This repository provides C++17 command-line tools for analyzing molecular structures by computing volumes, channels, cavities, and tunnel…☆14Feb 27, 2026Updated 3 weeks ago
- High Dimensional Discriminant Analysis in R☆11Jul 11, 2019Updated 6 years ago
- ☆17Apr 18, 2024Updated last year
- ☆10Apr 16, 2020Updated 5 years ago
- ☆10Mar 4, 2026Updated 2 weeks ago
- Analysis of co-fractionation MS datasets☆13Dec 7, 2021Updated 4 years ago
- A JupyterLab gallery for presenting and downloading examples☆11Feb 27, 2026Updated 3 weeks ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Mar 17, 2025Updated last year
- Proof of concept for @lumino/widgets in a React/Redux application☆14Jan 22, 2021Updated 5 years ago
- Notebook for standardization of actvity data, nonadditivity analysis and its evaluation.☆12Mar 16, 2023Updated 3 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆14Jan 8, 2026Updated 2 months ago
- Python package to query and analyse UniProt☆25Sep 8, 2020Updated 5 years ago
- Overlapping clustering algorithm for biological and non-biological networks alike☆14Dec 23, 2017Updated 8 years ago