Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers
☆17May 7, 2018Updated 8 years ago
Alternatives and similar repositories for repurpose
Users that are interested in repurpose are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Drug-disease proximity based therapeutic effect screening and analysis☆21Sep 8, 2017Updated 8 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Mar 16, 2021Updated 5 years ago
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Apr 12, 2023Updated 3 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- Predictors for Blood-Brain Barrier Permeability with resampling strategies based on B3DB database.☆13Aug 12, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This code allows is for diversity picking across multiple different, and potentially overlapping chemical compound classes, while at the …☆12Oct 30, 2020Updated 5 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆115Apr 2, 2022Updated 4 years ago
- CardiacProfileR: An R package for extraction and visualisation of heart rate profiles from wearable fitness trackers☆13Jun 10, 2018Updated 8 years ago
- PyCTD is a Python software package to query and analyse data from the CTD database☆12Oct 6, 2022Updated 3 years ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆29Sep 12, 2023Updated 2 years ago
- JupyterCon Website☆14Mar 3, 2023Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆24Oct 21, 2024Updated last year
- Augmenting a training dataset of the generative diffusion model for molecular docking with artificial binding pockets☆10Jul 17, 2026Updated last month
- Repository of Jupyter Notebooks on Colab, Binder and Huggingface for Bio, Chemistry and Physics☆13Jul 29, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Command-line tools for protein structure analysis: convert PDB, mmCIF, PDBML, or XYZR files into atomic sphere data, then compute volumes…☆15Jul 25, 2026Updated last month
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Jul 1, 2024Updated 2 years ago
- Interactive 3D visualization of networks with multiple layers☆38Aug 10, 2026Updated 3 weeks ago
- Repository for the code associated with the paper Impact of applicability domains by Maxime Langevin et al.☆13Feb 19, 2025Updated last year
- Generative models of chemical data for PaccMann^RL☆13Jun 2, 2023Updated 3 years ago
- Extension for profiling performance of JupyterLab UI for JupyterLab core developers, extension developers, and advanced users.☆14Jul 3, 2026Updated last month
- ☆13Jan 23, 2024Updated 2 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆29Mar 8, 2021Updated 5 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python API for Pharmer☆12Jun 14, 2019Updated 7 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- A JupyterLab gallery for presenting and downloading examples☆12Feb 27, 2026Updated 6 months ago
- High Dimensional Discriminant Analysis in R☆11Jul 11, 2019Updated 7 years ago
- ☆17Apr 18, 2024Updated 2 years ago
- ☆10Apr 16, 2020Updated 6 years ago
- Analysis of co-fractionation MS datasets☆13Dec 7, 2021Updated 4 years ago
- Notebook for standardization of actvity data, nonadditivity analysis and its evaluation.☆12Mar 16, 2023Updated 3 years ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆11Mar 17, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Proof of concept for @lumino/widgets in a React/Redux application☆14Jan 22, 2021Updated 5 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Tool for mining structure-property relationships from chemical datasets☆16May 5, 2026Updated 3 months ago
- Minimal Implimentation of VCRec (2024) for collapse provention.☆18Jan 28, 2025Updated last year
- Python package to query and analyse UniProt☆25Sep 8, 2020Updated 5 years ago
- MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…☆10Sep 7, 2022Updated 3 years ago
- Overlapping clustering algorithm for biological and non-biological networks alike☆14Dec 23, 2017Updated 8 years ago