cthoyt / doctoral-thesisLinks
๐ Generation and Applications of Knowledge Graphs in Systems and Networks Biology
โ30Updated 5 years ago
Alternatives and similar repositories for doctoral-thesis
Users that are interested in doctoral-thesis are comparing it to the libraries listed below
Sorting:
- ๐ช What's the latest version for each database?โ28Updated last week
- Harmonizing pathway databases using Biological Expression Language (BEL)โ20Updated last year
- Draft cell type definitions from data - candidates for inclusion in CLโ12Updated 5 months ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.โ18Updated last year
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ73Updated 2 weeks ago
- ๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaโฆโ57Updated last week
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)โ21Updated 4 years ago
- Ontology cross-reference and mapping serviceโ20Updated 7 months ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.โ14Updated 2 years ago
- API for linked biological knowledgeโ66Updated 3 years ago
- โ24Updated 5 years ago
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ138Updated this week
- Toolkit for constructing, analyzing, and visualizing data-driven ontologiesโ20Updated 6 years ago
- Faultless AST for Open Biomedical Ontologies in Python.โ31Updated 2 weeks ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in partโฆโ11Updated 2 years ago
- A project to capture biological pathway data from academic papersโ29Updated 8 months ago
- A knowledge resource on cell lines - From SIB CALIPHO groupโ14Updated last year
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)โ10Updated 5 years ago
- Project code for BioHackathon Europe 2023.โ18Updated last year
- Pathway visualization and analysis tool for Pathway Commons and other BioPAX dataโ13Updated 3 years ago
- A stitching platform for InXightโ15Updated 8 months ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)โ42Updated last week
- PyBioPAX: A python implementation of the BioPAX object modelโ24Updated last year
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://giโฆโ45Updated 3 years ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposingโ33Updated 8 years ago
- python library for working with ontologies and ontology associationsโ133Updated 10 months ago
- Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontologyโ17Updated 3 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Modelsโ197Updated last year
- BioThings API framework - Making high-performance API for biological annotation dataโ48Updated this week
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,โฆโ27Updated 3 months ago