OpenBioML / bio-chem-lmLinks
☆30Updated 2 years ago
Alternatives and similar repositories for bio-chem-lm
Users that are interested in bio-chem-lm are comparing it to the libraries listed below
Sorting:
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆98Updated 2 years ago
- bioinformatics tools running on modal☆114Updated this week
- [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.☆121Updated 2 months ago
- ☆133Updated last year
- Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"☆107Updated 2 years ago
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆99Updated 2 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆140Updated last week
- Benchmark for LLM-based Agents in Computational Biology☆68Updated 2 months ago
- A short course on proteins and protein design aimed at early career students☆166Updated last year
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated last year
- A Modular Architecture for Deep Learning Systems☆49Updated 7 months ago
- 🧬 ManyFold: An efficient and flexible library for training and validating protein folding models☆82Updated 3 years ago
- Sandbox for Deep-Learning based Computational Protein Design☆120Updated 2 weeks ago
- Automancer is a software application that enables researchers to design, automate, and manage their experiments.☆25Updated 2 years ago
- Directed evolution of proteins in sequence space with gradients☆93Updated 2 months ago
- ML-guided enzyme engineering☆69Updated 2 months ago
- TLDRs for ML in Drug Discovery papers☆71Updated 2 years ago
- Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax☆113Updated 4 years ago
- PDB ProtVista Viewer☆11Updated 5 months ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆269Updated last year
- Repository for mRNA Paper and CodonBERT publication.☆138Updated last year
- ☆58Updated last year
- Ankh: Optimized Protein Language Model☆238Updated 6 months ago
- ☆36Updated last year
- Attempt at reproduction of AlphaFold2☆99Updated last year
- A standard library for biological research.☆30Updated 3 months ago
- Minimal AlphaFold☆56Updated last year
- A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).☆145Updated 3 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆146Updated 8 months ago
- Predict the structure of immune receptor proteins☆56Updated last year