Alternatives and similar repositories for bio-chem-lm

Users that are interested in bio-chem-lm are comparing it to the libraries listed below

• hgbrian / biomodals
  bioinformatics tools running on modal
  ☆90Updated last week
• Future-House / BixBench
  Benchmark for LLM-based Agents in Computational Biology
  ☆40Updated last month
• lightonai / RITA
  RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…
  ☆96Updated 2 years ago
• prescient-design / lobster
  Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
  ☆112Updated this week
• OpenBioML / protein-lm-scaling
  ☆57Updated last year
• adaptyvbio / egfr_competition_1
  This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.
  ☆34Updated 5 months ago
• etowahadams / interprot
  ☆102Updated 2 weeks ago
• prescient-design / cortex
  A Modular Architecture for Deep Learning Systems
  ☆41Updated last week
• NREL / EvoProtGrad
  Directed evolution of proteins in sequence space with gradients
  ☆86Updated 10 months ago
• conradry / prtm
  Deep learning for protein science
  ☆34Updated last year
• whitead / minimalaf
  Minimal AlphaFold
  ☆53Updated 9 months ago
• AbSciBio / unlocking-de-novo-antibody-design
  ☆118Updated 9 months ago
• rmrao / evo
  Mono-repo for protein utilities.
  ☆18Updated 3 years ago
• PeptoneLtd / ADOPT
  ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers
  ☆18Updated 6 months ago
• Genentech / beignet
  A standard library for biological research.
  ☆26Updated last week
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆112Updated 2 weeks ago
• PDBeurope / protvista-pdb
  PDB ProtVista Viewer
  ☆10Updated 8 months ago
• felixjwong / antibioticsai
  Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"
  ☆96Updated last year
• google-deepmind / nuclease_design
  ML-guided enzyme engineering
  ☆63Updated last week
• sokrypton / seqmodels
  ☆31Updated 4 years ago
• biolists / biodiffusion
  A list of manuscripts/tools using diffusion on biological enttieis
  ☆96Updated last year
• NeurosnapInc / neurosnap
  Collection of useful bioinformatic functions and tools for various computational biology pipelines
  ☆24Updated this week
• amyxlu / cheap-proteins
  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…
  ☆122Updated last month
• ml-jku / cloome
  ☆38Updated 7 months ago
• kolibril13 / ipyMolecularNodes
  molecular plots in Jupyter, powererd by Blender Geometry Nodes
  ☆55Updated last year
• wells-wood-research / timed-design
  Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis
  ☆56Updated 7 months ago
• maslov-group / DR-BERT
  ☆24Updated 2 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆35Updated 4 years ago
• Genentech / equifold
  Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
  ☆121Updated 2 years ago
• yobibyte / ml-drug-discovery-tldrs
  TLDRs for ML in Drug Discovery papers
  ☆70Updated 2 years ago