Alternatives and similar repositories for siibra-explorer:

Users that are interested in siibra-explorer are comparing it to the libraries listed below

• openMetadataInitiative / openMINDS_SANDS
  A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
  ☆13Updated 4 months ago
• HumanBrainProject / ebrains-storage
  Python client interface for EBRAINS Collaboratory Drive (Seafile) and Bucket (data-proxy) storage
  ☆10Updated 4 months ago
• neuroscales / nifti-zarr
  A draft specification for the nifti-zarr format
  ☆13Updated last week
• HumanBrainProject / fairgraph
  High-level Python API for the EBRAINS Knowledge Graph
  ☆11Updated 3 weeks ago
• openMetadataInitiative / openMINDS_core
  The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research prod…
  ☆21Updated 2 weeks ago
• ntustison / ANTsXMouseBrainMapping
  The ANTsX Ecosystem for Mapping the Mouse Brain
  ☆11Updated last month
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆47Updated this week
• HumanBrainProject / pyunicore
  UNICORE REST bindings for python
  ☆9Updated last week
• HumanBrainProject / openMINDS
  openMINDS comprises a set of metadata models for research products in the field of neuroscience.
  ☆41Updated last year
• INCF / neuroshapes
  Open schemas for F.A.I.R. neuroscience data
  ☆41Updated last year
• childmindresearch / bids2table
  Efficiently index large-scale BIDS neuroimaging datasets and derivatives
  ☆16Updated last month
• InsightSoftwareConsortium / GetYourBrainTogether
  Get Your Brain Together Neuroimage Registration Workshops and Hackathons
  ☆20Updated 4 months ago
• FZJ-INM1-BDA / siibra-python
  Software interfaces for interacting with brain atlases - Python client
  ☆49Updated this week
• HumanBrainProject / neuroglancer-scripts
  Conversion of neuroimaging data for display in Neuroglancer
  ☆27Updated 3 months ago
• CAVEconnectome / MeshParty
  ☆36Updated this week
• NeurodataWithoutBorders / nwbwidgets
  Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
  ☆48Updated 3 weeks ago
• NeuroDesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆44Updated last week
• amun-ai / hypha
  A distributed application framework for large-scale data management and AI model serving
  ☆17Updated this week
• NeuroDesk / neurocontainers
  The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a conta…
  ☆25Updated this week
• int-brain-lab / atlas
  Brain flatmaps generation
  ☆10Updated 2 years ago
• bkntr / brainways
  Brainways
  ☆16Updated 3 weeks ago
• open-dicom / dicom_parser
  Facilitates DICOM data access.
  ☆30Updated 2 years ago
• Vaa3D / Vaa3D_Wiki
  www.vaa3d.org
  ☆79Updated 7 years ago
• saalfeldlab / render
  Render transformed image tiles
  ☆34Updated this week
• brainglobe / brainrender-napari
  A napari plugin to render BrainGlobe atlases and associated data as layers.
  ☆21Updated this week
• JaneliaSciComp / SharkViewer
  SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.
  ☆24Updated 2 years ago
• dandi / dandi-cli
  DANDI command line client to facilitate common operations
  ☆24Updated this week
• scalableminds / webknossos
  Visualize, share and annotate your large 3D images online
  ☆140Updated this week
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆23Updated this week
• Aswendt-Lab / AIDAmri
  Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain
  ☆30Updated this week