MoseleyBioinformaticsLab / jpredapiLinks
Python library and CLI for submitting jobs to JPred - A Protein Secondary Structure Prediction Server
☆10Updated 7 years ago
Alternatives and similar repositories for jpredapi
Users that are interested in jpredapi are comparing it to the libraries listed below
Sorting:
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆35Updated last year
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 9 years ago
- Short course using RStudio for biological data analysis☆14Updated 3 years ago
- Application for mutagenic primer design. Facilitates development of biocatalysts (Green Chemistry) and new therapeutic proteins.☆17Updated last week
- Explore biomolecular pathways in Reactome from the command-line or a Python script☆24Updated last year
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"☆28Updated 2 years ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 7 months ago
- Immunology Informatics - Big Data Analysis in Immunology - Tutorials☆23Updated 8 years ago
- Glycan Analysis and Glycoinformatics Library for Python☆36Updated 6 months ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.☆67Updated 2 years ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Updated 4 years ago
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆19Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆65Updated 3 years ago
- International BioHackathon Directory of Events, Projects and Communities☆12Updated 4 months ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11Updated 5 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆45Updated 5 months ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 3 years ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Updated 4 years ago
- DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring ve…☆43Updated 3 years ago
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Updated 4 months ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆35Updated 2 years ago
- simplified searching, fetching, and parsing records from NCBI using their E-utilities interface☆63Updated 2 months ago
- Python Client Library for the G2P Portal API☆13Updated 3 months ago