☆17Sep 16, 2021Updated 4 years ago
Alternatives and similar repositories for Leopard
Users that are interested in Leopard are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A DL-based framework for sequence and shape motif identification in the human genome☆11May 26, 2023Updated 2 years ago
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Jun 11, 2020Updated 5 years ago
- Codebase for the domain adaptation (cross-species TF binding prediction) project.☆12Aug 29, 2022Updated 3 years ago
- Linear Mode Connectivity in Multitask and Continual Learning: https://arxiv.org/abs/2010.04495☆12Oct 12, 2020Updated 5 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Jan 23, 2025Updated last year
- A deep learning package for predicting TF binding☆43Jan 23, 2020Updated 6 years ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- Website about the project WorkflowHub☆13Feb 12, 2026Updated 2 months ago
- ☆20Jul 28, 2025Updated 9 months ago
- ☆11Sep 4, 2025Updated 7 months ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- ☆14Sep 1, 2024Updated last year
- exploratory scripts for clustering ccs amplicon data☆11Feb 2, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Apr 6, 2021Updated 5 years ago
- A short tutorial to using DL and keras for genomics with sequence data.☆15Dec 3, 2020Updated 5 years ago
- Notebooks for CPA figures☆14Dec 9, 2022Updated 3 years ago
- LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model☆14Jun 18, 2021Updated 4 years ago
- A command-line tool for reading SAM/BAM files and converted them directly to bigwig files.☆21Apr 15, 2026Updated 2 weeks ago
- ML Workbench☆17Nov 22, 2022Updated 3 years ago
- ☆15Sep 14, 2021Updated 4 years ago
- ☆11Jan 12, 2024Updated 2 years ago
- Annotate genomics variations of hg19 by using a BED format database, which construct from NCBI annotation release 104☆19Aug 4, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Signed LD profile regression code☆19Aug 1, 2025Updated 8 months ago
- Reproducing the experiments in the paper☆11Dec 14, 2021Updated 4 years ago
- A Python library for performing DNA fragment-analysis☆13Aug 28, 2018Updated 7 years ago
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Dec 17, 2020Updated 5 years ago
- Assessing the reproducibility of proccessed ChIP-seq peaks☆13Mar 7, 2021Updated 5 years ago
- ChIA-PET Utilities☆13Dec 19, 2021Updated 4 years ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- ☆17Jul 6, 2023Updated 2 years ago
- Script to automate differential expression analysis using DESeq2, edgeR or limma-voom☆20Aug 22, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A machine-learning algorithm to predict CTCF-mediated long-range chromatin interactions☆17Nov 7, 2018Updated 7 years ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 5 years ago
- Code for reproducing the Sei manuscript results☆17Jan 25, 2022Updated 4 years ago
- DeepSEA implements in PyTorch☆25Jun 5, 2019Updated 6 years ago
- ☆19Mar 14, 2022Updated 4 years ago
- Code repository for study ''Evaluating the representational power of pre-trained DNA language models for regulatory genomics"☆24Jun 26, 2024Updated last year
- Using combined evidence from replicates to evaluate ChIP-seq peaks☆21Mar 14, 2026Updated last month