Materials and presentations for the 2021 ISB Virtual Microbiome Series.
☆29Mar 8, 2023Updated 3 years ago
Alternatives and similar repositories for isb_course_2021
Users that are interested in isb_course_2021 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- USDA Nutrition codes Tree☆11Feb 13, 2020Updated 6 years ago
- Materials and tutorials for the 2020 ISB Microbiome Course☆30Nov 10, 2022Updated 3 years ago
- Pipelines used in the lab.☆16Mar 26, 2025Updated last year
- Jaeger is a quick and precise tool for detecting viruses in sequence assemblies.☆10Oct 14, 2026Updated 2 weeks ago
- Classifiers trained on commonly used variable regions of Prokaryotic 16S rRNA genes☆18Jun 30, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆24Jan 24, 2024Updated 2 years ago
- Tutorial for Metagenomics Analyses☆10Jun 16, 2020Updated 6 years ago
- ☆15Feb 6, 2020Updated 6 years ago
- ☆13Apr 5, 2021Updated 5 years ago
- Repo for course Tools for complex data analysis☆11Jul 15, 2024Updated 2 years ago
- ☆13Jul 16, 2022Updated 4 years ago
- Materials and presentation for the 2022 ISB Microbiome course.☆27Jun 13, 2024Updated 2 years ago
- Workshop for NGS'18 conference, Barcelona 2018☆24Nov 22, 2018Updated 7 years ago
- ☆11Jul 3, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆27Jun 20, 2023Updated 3 years ago
- ☆29Sep 18, 2026Updated last month
- some code for linlog model simulation☆10Sep 16, 2021Updated 5 years ago
- Supplementary data for co-occurrence manuscript☆11Dec 19, 2019Updated 6 years ago
- Genome-informed, trait-based dynamic energy budget modeling of microbes with ML analysis of emergent strategies☆21Feb 18, 2026Updated 8 months ago
- Repository of Crop Origins database and Phylo Food phylogeny☆16May 6, 2026Updated 5 months ago
- Gene Inactivation Moderated by Metabolism, Metabolomics, and Expression (COBRApy)☆14May 7, 2016Updated 10 years ago
- Bacterial Genome Assembly and Assessment☆29Apr 28, 2026Updated 6 months ago
- ☆18Dec 2, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Collection of genome-scale metabolic models, genomes, and scripts for At-LSPHERE bacterial culture collection☆10Jul 25, 2023Updated 3 years ago
- Nanopore Real-Time Analysis Tool☆17Sep 4, 2024Updated 2 years ago
- Higher-Order Co-occurrence☆12Nov 9, 2021Updated 4 years ago
- A javascript library for building, exploring, and sharing spatially structured models of biological systems☆16May 26, 2026Updated 5 months ago
- ☆11Nov 17, 2020Updated 5 years ago
- A tool for distinguish temperate phage-derived and virulent phage-derived sequence in metavirome data using deep learning☆30Nov 20, 2023Updated 2 years ago
- Training materials for NODES 2021 training on Neo4j Aura☆19Sep 13, 2021Updated 5 years ago
- Python interface for running COMETS simulations and analyzing the results☆15May 19, 2026Updated 5 months ago
- refineGEMs is a python package inteded to help with the curation of genome-scale metabolic models (GEMS).☆22Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Organize & Run Build Scripts Comfortably☆15Apr 21, 2024Updated 2 years ago
- A pipeline creation tool using Snakemake☆14Updated this week
- Provides classes for working with sets☆11Oct 25, 2026Updated last week
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Nov 8, 2019Updated 6 years ago
- NGS-1 Data analysis course☆39May 10, 2026Updated 5 months ago
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated 9 months ago
- Standard tools and protocols for MiSeq amplicon sequencing of 16S rRNA genes☆10Nov 14, 2022Updated 3 years ago