Alternatives and similar repositories for RaMS:

Users that are interested in RaMS are comparing it to the libraries listed below

• schymane / RChemMass
  Various Cheminformatic, Curation and Mass Spectrometry Functions
  ☆13Updated 4 years ago
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆11Updated 3 years ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• sneumann / CAMERA
  This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
  ☆11Updated 10 months ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated 8 months ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆65Updated this week
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 8 months ago
• QizhiSu / mspcompiler
  Compile Mass Spectral Libraries from Various Sources
  ☆16Updated 9 months ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆13Updated last year
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• OrgMassSpec / OrgMassSpecR
  Organic/biological mass spectrometry data analysis (development version).
  ☆29Updated 7 years ago
• phenomecentre / peakPantheR
  On-instrument and post-acquisition targeted feature extraction
  ☆12Updated 8 months ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• nathaniel-mahieu / mz.unity
  mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  ☆13Updated 8 years ago
• mjhelf / Metaboseek
  Interactive software to analyze and browse mass spectrometry data
  ☆21Updated last year
• rformassspectrometry / Spectra
  Low level infrastructure to handle MS spectra
  ☆41Updated this week
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆26Updated last year
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated 2 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆9Updated 3 years ago
• KujawinskiLaboratory / Autotuner
  This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…
  ☆16Updated 4 years ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆16Updated last year
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆13Updated last year
• rformassspectrometry / MetaboAnnotation
  High level functionality to support and simplify metabolomics data annotation.
  ☆15Updated 2 months ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated 6 months ago
• fgcz / rawDiag
  Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
  ☆36Updated 9 months ago
• jorainer / SpectraTutorials
  These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…
  ☆19Updated 6 months ago