Alternatives and similar repositories for VAERS-Annotations:

Users that are interested in VAERS-Annotations are comparing it to the libraries listed below

• Tian312 / EliIE
  An information extraction system for free-text eligibility criteria
  ☆37Updated 6 years ago
• OHDSI / KnowledgeBase
  Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…
  ☆55Updated 6 years ago
• DeepPhe / DeepPhe-Release
  Public release of the DeepPhe analytic software
  ☆30Updated 2 years ago
• beamandrew / cui2vec
  ☆53Updated 5 years ago
• ncbo / ncbo_rest_sample_code
  Sample code that demonstrates the use of the NCBO REST services
  ☆44Updated last year
• p2 / ClinicalTrialsNLP
  Classes for ClinicalTrials.gov related projects
  ☆47Updated 5 years ago
• Tian312 / PICO_Parser
  A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework
  ☆45Updated 4 years ago
• i2b2 / i2b2-data
  The i2b2 data repository
  ☆40Updated last week
• sebastianGehrmann / phenotyping
  This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…
  ☆21Updated 6 years ago
• zliendo / AI_MedicalNotes
  Automatic classification of medical patient discharge notes into standard disease labels, using deep learning models
  ☆30Updated 6 years ago
• Melbourne-BMDS / mimic34md2020_materials
  ☆22Updated 2 years ago
• djm-35 / faers-data
  Data and basic scrubbing of the FDA Adverse Event Reporting System data
  ☆12Updated 9 years ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆59Updated 10 months ago
• ncbi-nlp / DeepRel
  A convolutional neural network model for relation extraction.
  ☆13Updated 2 years ago
• allenai / genia-dependency-trees
  Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.
  ☆22Updated 4 years ago
• drgriffis / PyUMLS
  Python wrapper for UMLS REST API
  ☆10Updated 6 years ago
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆31Updated 10 months ago
• anantzoid / Medical-Diagnosis-Learning
  Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model
  ☆34Updated 7 years ago
• blpercha / umls-to-graph
  Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.
  ☆41Updated 4 years ago
• DATEXIS / UMLSParser
  Python module to parse UMLS source files
  ☆19Updated 2 years ago
• CogStack / nlp2phenome
  using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)
  ☆10Updated 2 years ago
• kbogas / medknow
  Medical Relations and Entities Extraction
  ☆36Updated 2 years ago
• 2mh / PyBioC
  Python library for work with BioCreative files
  ☆13Updated 7 years ago
• medspacy / sectionizer
  A rule-based Python module for spitting documents into sections.
  ☆12Updated 4 years ago
• ltscomputingllc / faersdbstats
  Generate safety signal statistics from FDA FAERS data
  ☆49Updated 10 months ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆32Updated last year
• OHNLP / MedTator
  A Serverless Text Annotation Tool for Corpus Development
  ☆55Updated last month
• mghassem / medicationCategories
  Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…
  ☆29Updated 7 years ago
• celehs / PheCAP
  https://celehs.github.io/PheCAP/
  ☆21Updated 3 years ago