Alternatives and similar repositories for metamap

Users that are interested in metamap are comparing it to the libraries listed below

• kbogas / medknow
  Medical Relations and Entities Extraction
  ☆37Updated 3 years ago
• noc-lab / clinical_concept_extraction
  Clinical Concept Extraction with Contextual Word Embedding
  ☆40Updated 5 years ago
• jayded / evidence-inference
  Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…
  ☆65Updated 4 years ago
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆62Updated 3 years ago
• acadTags / Rare-disease-identification
  Rare disease identification from free-text clinical notes with ontologies and weak supervision
  ☆32Updated 2 years ago
• noc-lab / clinical-kb-bert
  ☆17Updated 4 years ago
• svjan5 / medtype
  MedType: Improving Medical Entity Linking with Semantic Type Prediction
  ☆116Updated 2 years ago
• anantzoid / Medical-Diagnosis-Learning
  Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model
  ☆34Updated 7 years ago
• r-mal / umls-embeddings
  Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System
  ☆40Updated 5 years ago
• lasigeBioTM / BiOnt
  BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction
  ☆27Updated last year
• clinicalml / HealthKnowledgeGraph
  Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
  ☆102Updated 4 years ago
• cambridgeltl / cometa
  Corpus of Online Medical EnTities: the cometA corpus
  ☆50Updated 7 months ago
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 6 years ago
• gmichalo / UmlsBERT
  ☆99Updated 3 years ago
• NLPReViz / emr-vis-web
  An Interactive Tool for Natural Language Processing on Clinical Text
  ☆22Updated 4 years ago
• zliendo / AI_MedicalNotes
  Automatic classification of medical patient discharge notes into standard disease labels, using deep learning models
  ☆30Updated 6 years ago
• Franck-Dernoncourt / pubmed-rct
  PubMed 200k RCT dataset: a large dataset for sequential sentence classification.
  ☆198Updated last year
• RyanDsilva / medical-ner
  Clinical NER with UMLS lookup
  ☆22Updated 5 years ago
• jgc128 / mednli
  MedNLI - A Natural Language Inference Dataset For The Clinical Domain
  ☆130Updated 2 years ago
• shreyashub / BioFLAIR
  BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks
  ☆42Updated 5 years ago
• OHNLP / awesome-clinical-nlp
  ☆18Updated 4 years ago
• Tian312 / EliIE
  An information extraction system for free-text eligibility criteria
  ☆38Updated 6 years ago
• dhchenx / umls-similarity
  Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)
  ☆16Updated 3 years ago
• CrowdTruth / Medical-Relation-Extraction
  Crowdsourced ground truth for medical relation extraction.
  ☆69Updated 6 years ago
• clips / clicr
  Machine reading comprehension on clinical case reports
  ☆149Updated last month
• wonjininfo / CollaboNet
  CollaboNet for Biomedical Named Entity Recognition
  ☆48Updated 6 years ago
• jind11 / PubMed-PICO-Detection
  PubMed PICO Element Detection Dataset
  ☆58Updated 7 years ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆78Updated 3 years ago
• MeRajat / SolvingAlmostAnythingWithBert
  BioBert Pytorch
  ☆116Updated 2 years ago
• hscells / cui2vec
  Utility for cui2vec in Go
  ☆13Updated 2 years ago