drgriffis / PyUMLS
Python wrapper for UMLS REST API
☆10Updated 6 years ago
Alternatives and similar repositories for PyUMLS:
Users that are interested in PyUMLS are comparing it to the libraries listed below
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆60Updated 2 years ago
- Medical Relations and Entities Extraction☆36Updated 2 years ago
- A rule-based Python module for spitting documents into sections.☆12Updated 4 years ago
- A near real-time named-entity recognizer☆59Updated 10 months ago
- ☆98Updated 3 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆86Updated 7 months ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 9 years ago
- ☆26Updated 4 years ago
- Transformers for Clinical NLP☆24Updated 2 months ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated last week
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]