scotthlee / NRCLinks
Natural language generation for discrete data in EHRs
☆22Updated 6 years ago
Alternatives and similar repositories for NRC
Users that are interested in NRC are comparing it to the libraries listed below
Sorting:
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Updated 7 years ago
- Medical Relations and Entities Extraction☆37Updated 3 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆108Updated last year
- An information extraction system for free-text eligibility criteria☆38Updated 6 years ago
- Flexible and powerful platform for biomedical information extraction from text☆39Updated 8 years ago
- Predicting adverse drug reactions from a knowledge graph☆28Updated 4 years ago
- ☆55Updated 5 years ago
- Automatic classification of medical patient discharge notes into standard disease labels, using deep learning models☆30Updated 6 years ago
- Utility for cui2vec in Go☆13Updated 2 years ago
- ☆98Updated 2 years ago
- Basic Python 3 tools to interact with UMLS lexica☆123Updated 6 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated last month
- ☆99Updated 3 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- Public release of the DeepPhe analytic software☆30Updated last month
- A near real-time named-entity recognizer☆61Updated 3 months ago
- A fine-tuned BERT using EHR notes.☆14Updated 6 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record☆107Updated 6 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆55Updated 7 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- Medical Similarity Dataset creation from SNOMED☆28Updated 3 years ago
- MedXN is a medication normalization system built upon Apache UIMA framework.☆24Updated last year
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 4 years ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆101Updated 4 years ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆85Updated last year
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆49Updated 3 years ago