DatomicsGroup / deepbio
This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list.
☆12Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for deepbio
- ☆19Updated 4 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆25Updated 7 months ago
- Network-based project to explore gene connectivity through biological scales☆21Updated 3 weeks ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆23Updated 7 months ago
- Interpretation by Deep Generative Masking for Biological Sequences☆34Updated 2 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Updated 5 years ago
- ☆23Updated last year
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 7 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- Deep learning model to predict degron sequences☆18Updated last year
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆55Updated 3 years ago
- Knowledge-primed neural networks☆34Updated last year
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- ☆10Updated 3 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Updated 5 years ago
- The Complete Python Antibody Library☆21Updated 3 months ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- Disease pathways in the human interactome☆23Updated 6 years ago
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Updated 5 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆24Updated 5 years ago
- Code for the analyses in the human reference interactome paper.☆26Updated last year
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆44Updated 5 years ago
- A deep-learning framework for multi-omics integration☆24Updated last year
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆12Updated 6 years ago
- Cancer Suppressor Gene and Oncogene Prediction using Deep Learning (CNN)☆10Updated 6 years ago
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆20Updated last year
- Graph Neural Network model for survival analysis from multi-omics data☆11Updated 2 years ago
- Function prediction using a deep ontology-aware classifier☆79Updated last year