This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list.
☆15Sep 7, 2025Updated 6 months ago
Alternatives and similar repositories for deepbio
Users that are interested in deepbio are comparing it to the libraries listed below
Sorting:
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…☆10Jun 9, 2022Updated 3 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆24Feb 27, 2026Updated 3 weeks ago
- iPat allows you to perform GWAS and GS with drags and clicks!☆11Jul 12, 2022Updated 3 years ago
- Jupyter notebook for the application of convolutional neural nets to toy DNA sequence data☆15Aug 25, 2021Updated 4 years ago
- GenoCraft: A Comprehensive, User-Friendly Web Platform for High-Throughput Omics Data Analysis and Visualization (https://arxiv.org/pdf/2…☆19May 28, 2025Updated 9 months ago
- TF analysis from epigenetic and Hi-C data☆19Apr 1, 2025Updated 11 months ago
- ☆17Apr 4, 2025Updated 11 months ago
- Workshops on Computational Biology organized by our lab☆10Mar 25, 2024Updated last year
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 7 years ago
- Code associated with MIX-seq manuscript☆15Aug 26, 2020Updated 5 years ago
- ☆11Jan 5, 2022Updated 4 years ago
- My bioinfo toolbox☆50Feb 6, 2025Updated last year
- a guideRNA database generation tool☆18Mar 3, 2025Updated last year
- Python wrapper for TA-Lib (http://ta-lib.org/).☆21Apr 6, 2023Updated 2 years ago
- CH485 - Artificial Intelligence and Chemistry☆14Jan 1, 2020Updated 6 years ago
- A library for writing chemical and biological data management systems☆10Oct 24, 2019Updated 6 years ago
- Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project☆12May 25, 2022Updated 3 years ago
- This is a Flask Crud Operation based on REST Principle☆14Sep 15, 2018Updated 7 years ago
- ☆10Dec 20, 2023Updated 2 years ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Sep 17, 2021Updated 4 years ago
- A Python wrapper for alvaDesc software☆10Oct 15, 2024Updated last year
- ☆10Sep 7, 2022Updated 3 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Jan 11, 2021Updated 5 years ago
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆30Jan 1, 2025Updated last year
- The Complete Python Antibody Library☆24Jan 28, 2026Updated last month
- Dockerized Version of the DiffDock model from MIT☆13May 22, 2023Updated 2 years ago
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- A lightweight visualization tool for molecules and their properties☆15Sep 19, 2017Updated 8 years ago
- ☆10Apr 22, 2019Updated 6 years ago
- Django based chemical database/inventory☆18Feb 20, 2014Updated 12 years ago
- A no hassle tool for analyzing your favorite CRISPR screen dataset!☆11Apr 16, 2021Updated 4 years ago
- Designed an algorithm to detect a license plate from a car and then used OCR to rcognize the Plate☆13Feb 19, 2014Updated 12 years ago
- Computational Biology Summer Program Hackathon☆13Jun 12, 2025Updated 9 months ago
- This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not…☆28Dec 31, 2023Updated 2 years ago
- A project - tutorial. Differential expression of RNAseq raw counts data using a Real world dataset in R. Packages covered 'DESeq2' and 'E…☆13Nov 18, 2022Updated 3 years ago
- CoNekT (short for Co-expression Network Toolkit) is a platform to browse co-expression data and enable cross-species comparisons.☆21Mar 5, 2023Updated 3 years ago
- Machine learning models on different topics and competitions☆10Dec 15, 2022Updated 3 years ago
- Genome-Genome circle synteny☆25Dec 1, 2023Updated 2 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Mar 4, 2026Updated 2 weeks ago