haiya1994 / BERELinks
☆50Updated 3 years ago
Alternatives and similar repositories for BERE
Users that are interested in BERE are comparing it to the libraries listed below
Sorting:
- ☆55Updated 4 years ago
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆39Updated 4 years ago
- Biomedical NLP Corpus or Datasets.☆62Updated 3 years ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆12Updated 5 years ago
- ☆32Updated last year
- This repository aims to track the progress in BioNER and give a related paper list and an overview of the state-of-the-art (SOTA).☆198Updated 4 years ago
- ☆35Updated 4 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 10 months ago
- The depository support training and testing BERT-CNN model on three medical relation extraction corpora: BioCreative V CDR task corpus, t…☆73Updated 5 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Repository for student projects within biomedical text mining from Lund University☆54Updated 2 years ago
- ☆26Updated last year
- Biomedical Relation Extraction with Knowledge Graph-based Recommendations☆8Updated last year
- CPI Extraction☆9Updated 2 years ago
- Detecting drug-drug interaction (DDI) has become a vital part of public health safety. This project is an implementation of NLP based app…☆17Updated 7 years ago
- Code for the paper Biomedical Event Extraction with Hierarchical Knowledge Graphs☆62Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- A Deep Learning Model for Protein Function Prediction☆17Updated 4 years ago
- Source code for "A Deep-learning System Bridging Molecule Structure and Biomedical Text with Comprehension Comparable to Human Profession…☆89Updated last year
- BERT for TCM clinical records classification. JAMIA 2019☆45Updated 5 years ago
- ☆230Updated 7 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆28Updated 2 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 3 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆86Updated 10 months ago
- Codes for the EMNLP'2020 paper "Predicting Clinical Trial Results by Implicit Evidence Integration".☆14Updated 4 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆90Updated 5 years ago
- ☆24Updated 4 years ago
- Joint Biomedical Entity and Relation Extraction with Knowledge-Enhanced Collective Inference☆40Updated 2 years ago
- Biomedical Term Annotator☆9Updated 3 months ago