pulimeng / CancerOmicsNetLinks
A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines
☆17Updated 2 years ago
Alternatives and similar repositories for CancerOmicsNet
Users that are interested in CancerOmicsNet are comparing it to the libraries listed below
Sorting:
- ☆16Updated 3 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated 2 years ago
- Predict drug response with graph convolutional network.☆9Updated 4 years ago
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆28Updated 5 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆49Updated 4 years ago
- Python package is for paper 'Predicting potential drug-drug interactions by integrating chemical, biological, phenotypic and network data…☆34Updated 8 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- ☆17Updated 8 months ago
- A deep learning model to predict anticancer peptides.☆22Updated 5 years ago
- ☆31Updated 6 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- A Python implementation for training a neural network for predicting drug-protein interactions using Keras and Tensorflow☆17Updated 6 years ago
- ☆13Updated 2 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Updated 4 years ago
- ☆17Updated 5 years ago
- Deep Learning Can Identify Explainable Reasoning Paths of Mechanism of Drug Action for Drug Repurposing from Multilayer Biological Networ…☆11Updated 9 months ago
- Python script for processing DrugBank XML to MySQL-ready CSV files☆18Updated 8 years ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆12Updated 2 years ago
- Method for drug repurposing from knowledge graphs and literature☆34Updated 4 years ago
- Code and analyses related to the ExaLearn drug design efforts☆12Updated 4 years ago
- Prediction of protein-protein interaction sites using convolutional neural network and improved data sets☆9Updated 4 years ago
- ☆16Updated 7 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆27Updated 11 months ago
- ☆11Updated 5 years ago
- Model to predict kinase-ligand pKi values.☆12Updated last year
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆10Updated 2 years ago