ChEB-AI / python-chebaiLinks
☆15Updated last week
Alternatives and similar repositories for python-chebai
Users that are interested in python-chebai are comparing it to the libraries listed below
Sorting:
- Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic☆20Updated last year
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆14Updated 3 weeks ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆14Updated last week
- Ms2 basEd saMple vectOrization (memo) package☆17Updated 2 years ago
- Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compo…☆51Updated 3 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆25Updated last year
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆33Updated 2 months ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆55Updated last month
- This repository contains training material for querying SIB (Swiss Institute of Bioinformatics) resources with SPARQL.☆12Updated last year
- https://taxonomicallyinformedannotation.github.io/tima☆12Updated 2 weeks ago
- The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …☆21Updated 3 months ago
- ☆31Updated last month
- Reaction Analysis through Imaging of Chemical Units☆16Updated last month
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆21Updated 2 years ago
- ☆20Updated 2 years ago
- ☆21Updated last week
- Project code for BioHackathon Europe 2023.☆18Updated last year
- A Rust library for parsing, writing and manipulating Genbank sequence files☆21Updated 9 months ago
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆138Updated this week
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆14Updated last month
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆29Updated 3 years ago
- Protein Sequence Annotation with Language Models☆25Updated 2 weeks ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆39Updated last month
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Updated 3 months ago
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆20Updated 4 months ago
- RetroPath2.0 to pathways☆18Updated last month
- ☆16Updated 3 years ago
- ☆12Updated last year
- Deep learning-based language model for glycan sequences☆17Updated 6 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated last year