CCMS-UCSD / GNPSDocumentation
Documentation for GNPS and related tools as written in mkdocs
☆39Updated 3 weeks ago
Alternatives and similar repositories for GNPSDocumentation
Users that are interested in GNPSDocumentation are comparing it to the libraries listed below
Sorting:
- Public Workflows at GNPS☆61Updated last year
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆38Updated 2 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 8 months ago
- asari, metabolomics data preprocessing☆48Updated last month
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆82Updated last month
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆30Updated 2 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆63Updated 3 weeks ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆64Updated last year
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆40Updated 5 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 4 months ago
- Thermo MSFileReader Python bindings☆68Updated 4 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆85Updated last month
- Democratizing ML in proteomics☆37Updated this week
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- Universal workbench incorporating msdial, msfinder, and mrmprobs☆69Updated this week
- ☆13Updated last year
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆117Updated last week
- A list of tools on proteomics using deep learning☆96Updated last year
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆54Updated 3 weeks ago
- The Multiplierz Proteomics Library☆24Updated last year
- Instrument Application Programming Interface☆46Updated 3 months ago
- .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific☆38Updated last month
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- Open-source C++ and Python module for opening binary timsTOF data files.☆48Updated last month
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆68Updated this week
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- ☆27Updated 9 months ago
- ☆26Updated last year
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆105Updated 3 months ago
- An R package for non-targeted LC-MS metabolomics☆18Updated 8 months ago