Alternatives and similar repositories for GNPSDocumentation:

Users that are interested in GNPSDocumentation are comparing it to the libraries listed below

• CCMS-UCSD / GNPS_Workflows
  Public Workflows at GNPS
  ☆61Updated last year
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆36Updated 2 months ago
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆43Updated 7 months ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 4 months ago
• systemsomicslab / MsdialWorkbench
  Universal workbench incorporating msdial, msfinder, and mrmprobs
  ☆67Updated this week
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆64Updated last year
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆48Updated 3 weeks ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last month
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆32Updated 2 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆40Updated 10 months ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆39Updated 4 months ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆36Updated last week
• BlaisProteomics / multiplierz
  The Multiplierz Proteomics Library
  ☆24Updated 11 months ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆55Updated 9 months ago
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆46Updated last year
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• compomics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆63Updated this week
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆103Updated 3 months ago
• MatteoLacki / timspy
  ☆20Updated 3 years ago
• systemsomicslab / mtbinfo.github.io
  ☆26Updated 8 months ago
• antonvsdata / notame
  An R package for non-targeted LC-MS metabolomics
  ☆18Updated 7 months ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• diogobor / Scout
  MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.
  ☆19Updated 5 months ago
• tiagolbiotech / NPOmix_python
  ☆13Updated last year
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆48Updated last month
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 3 years ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 9 months ago
• tvpham / iq
  An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics
  ☆30Updated last month
• xxao / msread
  Read popular mass spectrometry formats
  ☆9Updated last month
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆14Updated last month