sirius-ms / siriusLinks
SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)
☆130Updated last month
Alternatives and similar repositories for sirius
Users that are interested in sirius are comparing it to the libraries listed below
Sorting:
- a python package for molecular formula analysis in MS-based small molecule studies☆32Updated 5 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆71Updated 3 weeks ago
- ☆72Updated last year
- Public Workflows at GNPS☆64Updated last year
- Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.☆242Updated last week
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆58Updated 2 weeks ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆59Updated last year
- MS2Query - machine learning assisted library querying of MS/MS spectra☆53Updated last month
- A deep learning toolkit for mass spectrometry☆86Updated last week
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆30Updated last year
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆55Updated 2 weeks ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆42Updated 6 months ago
- Democratizing ML in proteomics☆51Updated 3 weeks ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23Updated 7 months ago
- Encoding MS/MS spectra using formula transformers for inferring molecular properties☆70Updated last year
- A python client for the ClassyFire API☆17Updated 5 years ago
- ☆36Updated last week
- Universal Deconvolution of Mass and Ion Mobility Spectra☆80Updated last week
- Deep learning framework for proteomics☆140Updated last week
- .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific☆39Updated 5 months ago
- Python package for efficient mass spectrometry data processing and visualization☆161Updated last week
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆147Updated this week
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆33Updated 2 months ago
- ☆27Updated 2 weeks ago
- ☆21Updated 10 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆20Updated last week
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Updated last year
- DeepLC: Retention time prediction for peptides carrying any modification.☆72Updated 2 weeks ago
- asari, metabolomics data preprocessing☆56Updated 3 weeks ago
- ☆29Updated last year