GTree is a brain-wide tool for neuron tracing.
☆17Jan 13, 2021Updated 5 years ago
Alternatives and similar repositories for GTree
Users that are interested in GTree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- we collected Gram-stained bacteria images from lower respiratory tract specimens of patients with lung infections in Chinese PLA General…☆12Jan 18, 2024Updated 2 years ago
- ☆16Nov 2, 2016Updated 9 years ago
- 3 Minutes Machine Learning☆16Dec 8, 2022Updated 3 years ago
- Simple watershed and agglomeration library for affinity graphs.☆30Sep 18, 2025Updated 8 months ago
- Flow-Registration toolbox for 2P motion compensation☆27Sep 16, 2025Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 4 years ago
- PyNeval, a toolbox for quantative analysis on neuron reconstruction result.☆17Nov 18, 2021Updated 4 years ago
- Automatic segmentation of electron microscopy volumes☆30Oct 23, 2012Updated 13 years ago
- Automatically exported from code.google.com/p/ac-dc☆14Dec 8, 2015Updated 10 years ago
- A python package for the topological analysis of neurons.☆28Feb 26, 2025Updated last year
- Open-source volumetric brain vasculature dataset — 12 two-photon microscopy stacks with dense voxel-level segmentation labels☆17Feb 16, 2026Updated 3 months ago
- Randomized Solvers for Large-scale Least-Squares Problems with Spark☆10May 27, 2015Updated 10 years ago
- AR1MA1 - VBEM reverse engineering GRNs method☆11Sep 26, 2019Updated 6 years ago
- Deep Learning for EM Connectomics☆16Aug 18, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Oct 27, 2021Updated 4 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- Cylindrical Shape Decomposition☆16Dec 8, 2022Updated 3 years ago
- A Simple Framwork for CV Pre-training Model (SOCO, VirTex, BEiT)☆15Oct 18, 2021Updated 4 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆202May 18, 2026Updated last week
- A curated list of resources for 3D segmentation of neurites in EM images☆57Mar 11, 2024Updated 2 years ago
- TREES toolbox☆29Apr 23, 2025Updated last year
- Electron Microscopy Images, Neuron Segmentation Task. https://cremi.org☆17Mar 10, 2018Updated 8 years ago
- Website for the MIT/Harvard Computational Neuroscience Journal Club☆11Apr 7, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Reproduce analyses in Harmony Manuscript☆11Feb 21, 2020Updated 6 years ago
- Janelia Workstation☆28Apr 15, 2026Updated last month
- ☆10Jan 7, 2020Updated 6 years ago
- This is an official implementation of the MICCAI2024 paper "Self-supervised 3D Skeleton Completion for Vascular Structures".☆17Jun 10, 2025Updated 11 months ago
- ☆21May 19, 2025Updated last year
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago
- Create diagrams and visualizations using text and code. Powered by mermaid.js.☆11Mar 16, 2024Updated 2 years ago
- A Prot paper related materials☆11Sep 5, 2022Updated 3 years ago
- Robust Orthonormal Subspace Learning in Python☆15Jun 1, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Beyond Gradient Descent for Regularized Segmentation Losses☆11Sep 27, 2019Updated 6 years ago
- Tool to bridge Blender animation and physics-based robotic simulation☆18Feb 27, 2026Updated 2 months ago
- Curvature and Laplace-Beltrami estimation on triangulated surface meshes☆20Jun 14, 2019Updated 6 years ago
- Awesome Visual Tracking☆24Oct 3, 2025Updated 7 months ago
- MATLAB implementation of '2D and 3D Vascular Structures Enhancement via Multiscale Fractional Anisotropy Tensor (MFAT)'☆20Sep 17, 2018Updated 7 years ago
- Cairo lua bindings with extensions for torch☆15Jun 12, 2016Updated 9 years ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago