GTree is a brain-wide tool for neuron tracing.
☆17Jan 13, 2021Updated 5 years ago
Alternatives and similar repositories for GTree
Users that are interested in GTree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Nov 2, 2016Updated 9 years ago
- 3 Minutes Machine Learning☆16Dec 8, 2022Updated 3 years ago
- MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning☆49Aug 2, 2019Updated 7 years ago
- www.vaa3d.org☆114Apr 25, 2024Updated 2 years ago
- Simple watershed and agglomeration library for affinity graphs.☆31Sep 18, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 5 years ago
- Randomized Solvers for Large-scale Least-Squares Problems with Spark☆10May 27, 2015Updated 11 years ago
- A python package for the topological analysis of neurons.☆29Feb 26, 2025Updated last year
- AR1MA1 - VBEM reverse engineering GRNs method☆11Sep 26, 2019Updated 6 years ago
- TREES toolbox☆29Aug 28, 2026Updated 3 weeks ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆216Jul 24, 2026Updated last month
- Deep Learning for EM Connectomics☆16Aug 18, 2022Updated 4 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆46Jul 28, 2025Updated last year
- ☆19Oct 27, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A curated list of resources for 3D segmentation of neurites in EM images☆59Mar 11, 2024Updated 2 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- Brain-inspired differentiable PyTorch toolkit for neuromorphic and computational neuroscience research☆29Sep 16, 2026Updated last week
- Electron Microscopy Images, Neuron Segmentation Task. https://cremi.org☆17Mar 10, 2018Updated 8 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- This is an official implementation of the MICCAI2024 paper "Self-supervised 3D Skeleton Completion for Vascular Structures".☆17Jun 10, 2025Updated last year
- ☆10Jan 7, 2020Updated 6 years ago
- Website for the MIT/Harvard Computational Neuroscience Journal Club☆11Apr 7, 2025Updated last year
- 2D/3D biopolymer network extraction and quantification.☆21Mar 29, 2026Updated 5 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Create diagrams and visualizations using text and code. Powered by mermaid.js.☆11Mar 16, 2024Updated 2 years ago
- 为AI Agent设计的小红书搜索和总结技能(Skill):提取小红书图文与评论,并由大模型自动合成综合调研报告。 An AI Agent Skill that automates Xiaohongshu (小红书) searching and summarization …☆37Mar 10, 2026Updated 6 months ago
- Reproduce analyses in Harmony Manuscript☆11Feb 21, 2020Updated 6 years ago
- Robust Orthonormal Subspace Learning in Python☆15Jun 1, 2020Updated 6 years ago
- ☆17Feb 3, 2018Updated 8 years ago
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆14Sep 7, 2021Updated 5 years ago
- Beyond Gradient Descent for Regularized Segmentation Losses☆11Sep 27, 2019Updated 6 years ago
- A Prot paper related materials☆11Sep 5, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Implemention of "Realtime Multi Person Pose-Estimation" in pytorch with data from AI Challenger☆13Nov 24, 2017Updated 8 years ago
- Simple mathematica documentation generator☆11Apr 13, 2019Updated 7 years ago
- ☆17Jan 6, 2020Updated 6 years ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆75Aug 25, 2026Updated 3 weeks ago
- The mutex watershed for image segmentation.☆68May 6, 2021Updated 5 years ago
- Curvature and Laplace-Beltrami estimation on triangulated surface meshes☆22Jun 14, 2019Updated 7 years ago
- Cairo lua bindings with extensions for torch☆15Jun 12, 2016Updated 10 years ago