tingzhao / neutubeLinks
☆20Updated 5 years ago
Alternatives and similar repositories for neutube
Users that are interested in neutube are comparing it to the libraries listed below
Sorting:
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- The ImageJ framework for quantification of neuronal anatomy☆50Updated this week
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆52Updated last week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆50Updated last year
- ☆34Updated 2 months ago
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- ☆8Updated 3 years ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆123Updated 2 weeks ago
- ☆45Updated 5 years ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆17Updated 4 months ago
- QC and cell type assignment for patch-seq transcriptomics data☆20Updated last year
- Binary releases of Vaa3D and related software components☆45Updated last year
- motion correction☆17Updated 2 years ago
- A Python interface to access neuroanatomical atlases☆156Updated this week
- Serial-section automated anatomy extension for ScanImage☆15Updated 3 weeks ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆27Updated 2 weeks ago
- Automated 3D brain registration with support for multiple species and atlases.☆134Updated last week
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last week
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- ☆40Updated 3 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated 4 months ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- ☆11Updated this week
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆84Updated last month
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated last week
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago